Paraglaciecola psychrophila: C427_0684
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Entry
C427_0684 CDS
T02535
Name
(GenBank) beta-lactamase domain-containing protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
gps
Paraglaciecola psychrophila
Pathway
gps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C427_0684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gps03019
]
C427_0684
Messenger RNA biogenesis [BR:
gps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C427_0684
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Phage_mat-A
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AGH42794
UniProt:
K7AMR6
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All DBs
Position
640081..641379
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AA seq
432 aa
AA seq
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MNLYGHAGQWLMMDCGITFNSPLCTEAESKTSGLHKHDVVAADPWFISQRKEQLAGIVIT
HAHEDHIGALPYLWRRFKCPVYTTKYTAEILRRKLARDGQGDNIPIIEIESGERVDIGEF
NVEWMLITHSLPEPHAFVIRTPAGNVFHTADWKIDLAPVTDKPFNAHAFKRLAKQNILAM
VCDSTNATREGHSVSEQQCYTGLKQAVANATGRVVVGCFSSNIARLITLAKIAKETGRYF
ALFGRSLQNTVGAAKATGHWPDDLPVLDAFNAGYLLPKEVLAVATGSQGEPRAALNQLAK
DTYRNVSLDEGDLVIFSSIVIPGNETSIENLLKAYKARKIQTLMADDSELPIHASGHPCQ
EELKQMYEWVRPQIAVPTHGEAEHLQANADIARLSHVPISLTGLNGDLFILAPEVKVMKQ
AVRSGRIALQQS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgtatggccatgctgggcagtggttgatgatggactgtggcatcacttttaat
agtccactttgcacagaagcagaatctaaaacttcaggactacataaacatgacgttgtg
gctgccgacccttggtttattagtcagcgcaaagagcagctagcgggcattgtgatcact
catgcgcatgaggaccatataggggctttgccttatttatggcgtcgctttaaatgccct
gtttacaccaccaaatacactgcagaaatattgcgccgcaagcttgcccgtgatggtcag
ggagacaacattccgatcatcgaaatagaaagtggcgagcgtgtggatattggtgaattt
aacgtggaatggatgctgattacccattcattacctgagcctcatgcttttgtgataaga
acgccagctggcaatgtttttcataccgcggactggaaaattgacctcgcgccggtgaca
gataaaccctttaacgcccatgcttttaaacgattagccaaacaaaatattttagccatg
gtttgtgattcaacgaatgccactcgcgaaggacattctgtgtctgagcagcaatgttat
acgggcctaaaacaagccgtcgcaaacgcgacaggacgggttgtagtggggtgttttagt
agtaatattgcgcgcttgattaccttagcaaaaatagccaaagaaacaggacgctacttt
gcattgtttggtcggtcattacaaaatactgttggcgccgccaaagccacagggcattgg
cctgatgatttgccggtactggatgcgtttaatgccggatatttattaccaaaagaagtg
ttagccgtagcaacaggaagccaaggcgagcccagagctgcattaaatcaactcgctaaa
gacacctatcgcaatgtatccctggacgagggggatcttgtgattttcagctctattgtg
atacccggcaatgaaacatcaatcgagaacctgcttaaagcctataaagcccgcaagatt
caaaccttgatggccgatgactcagagctacctattcatgcctcagggcatccatgtcag
gaagaactaaaacaaatgtacgaatgggtgcgcccacaaattgctgtgcccactcacgga
gaagccgagcatttacaagccaatgcagacatagcccgtttaagtcatgtgcctataagt
ttgactgggttgaatggcgacttgtttatactggctccagaggtaaaagtaatgaagcag
gcggttagatcaggaaggatcgctttgcagcaatcttag
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