Paraglaciecola psychrophila: C427_1095
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Entry
C427_1095 CDS
T02535
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gps
Paraglaciecola psychrophila
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gps03400
]
C427_1095 (sbcD)
DNA repair and recombination proteins [BR:
gps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C427_1095 (sbcD)
Archaeal homologous recombinant proteins
C427_1095 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
AGH43204
UniProt:
K7ANP0
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Position
1019676..1020971
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AA seq
431 aa
AA seq
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MKLLHTSDWHLGQSFFTKSRKDEHQAFINWLLMQVEQQQVDAVIIAGDIFDTGTPPSYAR
EMYNQFVVDMQQLNCVLVVLGGNHDSVSTLNESKQILACLNTFVVASTGIAIDEQVFTIP
DKSGQPGAILCAVPFIRARDVLQSTAGETGLQKRQALGDAIKQHYQTLYQIALLKQKEQK
ANGLNIPIIATGHLTALGVSQSESVRDIYIGTLDGFAADGFPPADYIALGHIHKPQIVAK
SEHIRYCGSPIPLSFDELGTQKQVMLVEFSEALRTSLQPISIPIFQPMLVIKGDLAKIEK
ALQQLNADAKADIKVDISAQPFWLCLEVDTQDYLSDLQQRIQTMTQGLNVEVLQLRRTRN
QRRQLLSQMQSETLAELTPEDVFEKRLAMETFDKSPEVDSEKTDEQHTTLQQVRQRFSQI
LSEVEHQGTDV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaagctactgcatacctctgactggcatttaggtcagagtttttttaccaaaagtcgc
aaggatgaacatcaggcatttatcaactggttattaatgcaagttgaacagcaacaggtt
gatgccgtgatcatagctggggatatttttgatactggcactccgcccagttacgcacga
gaaatgtataatcagtttgtggtggatatgcaacagcttaactgtgtgttggtggtgctt
ggcggcaatcatgactcggtgtctacgctaaacgaatccaaacaaattctggcatgttta
aatacatttgtggtggccagcaccggcatagcaattgacgaacaagtgtttactatcccc
gataagtcaggccagcctggggctattttatgtgccgtgccttttatccgggccagagat
gtgttgcaaagcacggcaggtgaaaccggattacaaaaacgccaagctctaggcgatgcg
attaagcagcattaccaaacactttatcaaatagccttacttaaacaaaaagaacaaaaa
gcaaacgggctaaatatccccatcattgctaccggccatttaaccgcgctaggcgtcagt
caatctgaaagtgtgcgtgacatttacatcggtaccttagacggctttgccgcagacggt
ttcccccctgccgactacattgcactggggcatattcataaaccgcagatagtagctaag
tcagaacacattcgttattgcggctcgcctattcctttaagttttgatgaactgggcacc
caaaagcaagtgatgctggtggagtttagcgaagcactgcgcaccagtttacaacctatc
agcattcctatttttcagcccatgttagtgattaagggcgaccttgcaaaaattgagaaa
gcactacagcagcttaacgctgatgcaaaagctgacataaaagttgatataagtgcgcag
cccttctggttatgtcttgaggtggatactcaggattatttatcggatctgcagcagcgt
attcaaactatgacacaggggctaaatgtagaggtattgcaactgcgccgcacgcgcaac
cagcgcagacaattacttagccaaatgcaaagtgaaacccttgcggaattaacccccgaa
gacgtatttgaaaaacgcttagccatggagacatttgataaaagccctgaagtagactca
gaaaaaaccgatgaacaacacaccacactgcaacaagtgcggcaacggtttagccaaata
ttgtctgaagtagaacatcaggggacggatgtatga
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