Paraglaciecola psychrophila: C427_1647
Help
Entry
C427_1647 CDS
T02535
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
gps
Paraglaciecola psychrophila
Pathway
gps00521
Streptomycin biosynthesis
gps00523
Polyketide sugar unit biosynthesis
gps00525
Acarbose and validamycin biosynthesis
gps00541
Biosynthesis of various nucleotide sugars
gps01100
Metabolic pathways
gps01110
Biosynthesis of secondary metabolites
gps01250
Biosynthesis of nucleotide sugars
Module
gps_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C427_1647 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C427_1647 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
C427_1647 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C427_1647 (rfbB)
00525 Acarbose and validamycin biosynthesis
C427_1647 (rfbB)
Enzymes [BR:
gps01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
C427_1647 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
AGH43756
UniProt:
K7A0M1
LinkDB
All DBs
Position
1547469..1548569
Genome browser
AA seq
366 aa
AA seq
DB search
MKKLLVTGGAGFIGANFVHYWMAKYSADKVVVLDALTYAGNIANLDSVKDDANFNFVHGN
ICDQALIETLLVEHSIDTLVHFAAESHVDRSITGPDAFIETNIIGTYSLLKSAKKVWLDG
KSILEGHRFHHVSTDEVYGTLSPTDPAFTESTAYAPNSPYSASKAASDHLVRAYHHTYGL
NVTTSNCSNNYGPFHFPEKLIPLVITNILHDKALPIYGDGQQIRDWLYVEDHAYGIDLVL
QNGRVGENYNIGGDNEWTNIDIVKTISKLVEQEFLKNKDLATRFPAAKAAMAQNTESLIS
YVKDRLGHDRRYAIDATKTINELSYKPKESFETGIAKTVAWYLNNEAWWQSVMDGSYQNW
IAEQYS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattattagttacaggtggtgcaggttttattggtgccaattttgtacattat
tggatggcaaaatattcagccgataaagttgtggtactcgacgcgctaacttatgcaggc
aatattgctaatttagatagcgtaaaagacgatgctaactttaattttgtccatggcaat
atttgtgaccaagccttaattgagacattactggttgaacacagtattgataccttagtg
cattttgcggcagaatctcacgttgaccgttcgattacaggccctgatgcctttatcgaa
accaatattattggcacttatagtttacttaaatcggctaaaaaagtgtggttagatggt
aagagtattcttgaaggacatcgctttcatcatgtgtctaccgatgaagtttatggcacg
ctttcacctaccgaccctgcttttacagaaagcacggcttatgcgcctaactcaccctat
tcggccagtaaagccgctagtgatcatttagtgcgagcttatcaccatacatatgggtta
aatgttactaccagtaattgttcaaacaactatgggccgttccattttcctgaaaagctt
attcctttagttattactaatattttgcatgataaagcgttgccaatatacggtgatggt
caacaaattcgtgattggttatacgttgaagaccatgcttacggcattgatttagtctta
caaaatggccgagttggtgaaaattacaatattggtggcgataatgaatggacaaatatt
gatattgttaaaaccatttcaaaattggttgaacaagaatttttgaaaaataaagactta
gcgactcgttttcctgcggctaaagcggcgatggcgcaaaacactgagtcacttattagt
tacgttaaagaccgacttggccacgaccgtcgttatgctattgacgcgaccaaaactatt
aatgagttgagctataagcctaaagagtcgtttgaaacaggtattgctaaaaccgttgct
tggtatttgaataatgaagcttggtggcaaagtgtgatggatggctcgtaccaaaactgg
atagcagagcaatattcataa
DBGET
integrated database retrieval system
