Paraglaciecola psychrophila: C427_1808
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Entry
C427_1808 CDS
T02535
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gps
Paraglaciecola psychrophila
Pathway
gps03030
DNA replication
gps03430
Mismatch repair
gps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C427_1808
03430 Mismatch repair
C427_1808
03440 Homologous recombination
C427_1808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gps03032
]
C427_1808
03400 DNA repair and recombination proteins [BR:
gps03400
]
C427_1808
Enzymes [BR:
gps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C427_1808
DNA replication proteins [BR:
gps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C427_1808
DNA repair and recombination proteins [BR:
gps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C427_1808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
RuvB_N
AAA_5
AAA_14
ResIII
AAA_18
AAA_2
AAA_30
AAA_assoc_2
AAA_19
Rad17
AAA_7
PIF1
nSTAND3
AAA_24
DnaA_N-like_STI
Motif
Other DBs
NCBI-ProteinID:
AGH43917
UniProt:
K7A9C4
LinkDB
All DBs
Position
1701854..1704391
Genome browser
AA seq
845 aa
AA seq
DB search
MSYQVLARKWRPNRFGELVGQEHVVTAISNALDNNRLHHAYLFTGTRGVGKTTIARIFSK
SLNCEQGLSAKPCGQCSTCKEIENGNFIDLLEIDAASRTKVEDTRELLDNVQYKPSRGRF
KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFNLKALSR
TQISQQLDFVLGEEGIVFDKEALNQLARAAQGSMRDALSLTDQAIAQGNGVVSLQIVTDM
LGLMDKNQVLKLVHAIVQKDSAAVMQQVEFMANQAPDYGLVLAEIMSLLHQIALTQFVPD
ACKLETISARAIFQLAKSVPAEQIQLLYQIALTGKKDLPHAADARTGLEMTLLRMLAFCP
DNVKMEALDIVALTPKVDGRSQQAAIQETSQTSDHVNSASVVTKPTAHVADDVVHQNQPL
LEPVAERLEQNSSVAAVIAENQSPVQQDVSTESLSEILPEISPEISPLSRQEQTDEFDDV
LTTASDIDLFAQQQDIMAQAADFGHHQPNDYEQYQPVALDERPHQAFDVEHEPINNENPG
MHTQPTEQLTGTKPTTSTADLIALRNKLKQRQRDGGEGAERVKKSESAKPFNLAAIRKQN
QEAANQPAATYDDRQSQDIPAASAPVSQLQVTPLSAGHVIDNSPPWPVENESQSTAVVAP
MPSAEFTHVLSPLVSSPFSVEKTLQEAEYFDSSAHLDEENVGEVTQEISAFLPNKQKVLK
ALQIDGWSQLIEDIQVTALTKQLALHSSFNQQGNTVKLILLETKVHLISETAQQQLKEAL
CLALNSPIELEIELGRPINTPYALQLKVNQVRHEYAREVVKSDPGIQLLQKQFAAKVDEQ
SIRAR
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagttttagcaaggaaatggcgacctaaccgttttggcgagttagttggg
caagaacatgtcgttaccgccatttctaatgcgcttgataacaatagattgcatcatgct
tatttatttaccggtacgcgaggtgttggcaaaaccactatcgcccgtattttttcaaaa
agtttaaattgtgaacaaggtttaagtgctaaaccttgtggacaatgtagtacctgtaaa
gaaatcgaaaatggcaactttattgatttgcttgaaatagatgccgcatcacgaactaag
gtggaagatacccgcgagttgcttgacaacgtgcaatacaaacccagccgtggtcgcttc
aaagtttatttgatcgatgaagtccacatgttgtcaaagcatagttttaatgctttgttg
aaaacccttgaagagccaccgcctcatgtaaaattcttattggcgacgactgacccacaa
aaactaccagtaacgattttatcccgctgtttacaatttaatcttaaggccttgtctcgc
acacaaatcagccagcaattagattttgtactgggcgaagaaggcattgtgtttgataaa
gaagcgcttaaccaattagctagagctgcccaaggtagtatgcgtgatgcgttaagtctg
accgaccaagccattgcccaaggcaacggtgtagtgagtttgcagattgtcacagatatg
ctgggcttgatggacaaaaatcaggtgcttaagttagttcacgctatcgtacaaaaagat
agtgcggcggttatgcaacaagtcgagtttatggctaatcaagcaccagactatggcttg
gtgctggctgaaattatgagcttgttacaccaaattgccttaacccaatttgtgcctgac
gcatgtaaattagaaacaatttcagccagagctatttttcaattggctaaatctgtgcct
gctgaacagattcaattactatatcaaattgccctaacaggtaaaaaagacttaccccat
gcagctgatgctagaacaggtctagaaatgaccttgttgcgtatgttggccttctgccct
gataatgtgaaaatggaagcgctagatattgttgctttaactccaaaggttgatgggcgg
tcacaacaagctgccattcaggaaacaagtcaaacaagcgaccatgttaactcagcctcg
gtagtgactaagcctaccgcccatgttgctgatgatgtggtacatcaaaaccagccttta
cttgaacctgttgcggagcgtttggagcaaaacagttctgtagctgcggtgatagctgaa
aaccagtcgcctgtgcaacaagacgtcagtactgagtctttatctgaaatattacccgag
atttcacccgaaatttcgcccttatcccgacaagaacaaactgatgagtttgatgatgtt
ctaacaacagcatcagacattgacttatttgctcaacagcaagatataatggcgcaagca
gcagactttggtcatcatcagccgaacgattacgaacaataccagcctgttgcattggac
gagcgcccgcatcaagcatttgatgttgagcatgagccaatcaacaatgaaaatcctggg
atgcatacgcagcctactgagcagcttaccggtacaaaacctactacctcgacagctgat
ttaatagcacttcgcaataagcttaaacaaagacaacgtgatgggggggaaggggctgaa
cgagtaaaaaagtctgaaagtgccaagccatttaatttagccgcgatccgcaagcaaaac
caagaagctgcaaatcagcctgctgctacttatgacgataggcaaagtcaggatatacct
gcagcatctgctccagtatctcaactgcaagtaacacctcttagcgcaggccatgtaata
gataactcaccgccttggccggtcgaaaacgagtcacaatctacagcggtagttgcaccg
atgccttcagctgagtttacacacgtgctttcacccttggtcagcagccctttctcagta
gaaaaaacgcttcaggaagcagaatacttcgattctagtgctcatttagacgaagaaaat
gttggtgaagtcacccaagagatttctgcttttttaccgaataaacaaaaagtcttaaaa
gctttacaaattgatggctggagtcaattaattgaagatattcaagtaacggctttaaca
aaacaattggccttgcactcttcttttaatcagcaaggcaacacagtcaaattgattctt
ttagagactaaagtacatcttatttctgaaaccgcacagcaacagcttaaagaggcgctg
tgtttagcacttaatagtccgattgagcttgaaatcgagctagggcgacccattaacact
ccttatgctttgcaattaaaagttaaccaagtgcgtcatgaatacgcgagggaagtagtg
aagagtgatcccggcatccaattgttacaaaaacaatttgctgccaaggtcgacgaacaa
agtattcgagcaagatag
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