Paraglaciecola psychrophila: C427_2730
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Entry
C427_2730 CDS
T02535
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gps
Paraglaciecola psychrophila
Pathway
gps03030
DNA replication
gps03430
Mismatch repair
gps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C427_2730
03430 Mismatch repair
C427_2730
03440 Homologous recombination
C427_2730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gps03032
]
C427_2730
03400 DNA repair and recombination proteins [BR:
gps03400
]
C427_2730
Enzymes [BR:
gps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C427_2730
DNA replication proteins [BR:
gps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C427_2730
DNA repair and recombination proteins [BR:
gps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C427_2730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
DUF4032
Motif
Other DBs
NCBI-ProteinID:
AGH44839
UniProt:
K7A1C4
LinkDB
All DBs
Position
2577359..2578066
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AA seq
235 aa
AA seq
DB search
MRQVVLDTETTGLDPKQGHRIIEIGCVEMINRRLTGNTFHVYINPQRLVEQEAIGVHGIT
NEYLTDKPVFKSIANEFIDFISGAQLVIHNAPFDIGFMDHEFNRLTGLAVKESAKMCTVL
DTLDMARQIHPGQKNNLDALCRRYGIDNSHREKHGALLDAEILADVYLLMTGGQTDLNLS
GKASGEGGLQVETIRRLSAQRKPLKVVMATADELEQHEIRLDLVAEKGGACIWRE
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaagttgtattagataccgaaaccactggattagatccgaaacaaggccaccgt
attattgaaataggctgtgtggaaatgataaatcgtcgtctgacgggaaataccttccac
gtttacatcaatcctcagcgcctagtcgagcaagaagcgataggggtccacgggatcacc
aatgaatatctgacagacaagcctgtctttaagtcgatagctaatgaatttattgatttt
attagtggcgctcagctggtgatccacaatgcaccatttgatattggatttatggatcat
gaatttaataggctgacaggtctggcagtcaaagagtctgccaaaatgtgtactgtgctc
gacacactagatatggcaagacagattcatccggggcaaaagaacaaccttgatgcattg
tgcaggcgttatggcatcgataactcacatcgagagaaacacggtgcgttgttagatgca
gagattttggctgatgtgtatctgttgatgacaggtggccaaactgaccttaatttaagt
ggtaaggctagcggtgaaggtggcttgcaagtagaaactattcgtcgactgtctgctcaa
agaaaaccattaaaggttgttatggcaacggccgatgaattagaacagcacgaaattcgc
ttggatttagtggctgaaaaaggtggcgcctgtatatggcgtgaatag
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