Paraglaciecola psychrophila: C427_2754
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Entry
C427_2754 CDS
T02535
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gps
Paraglaciecola psychrophila
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gps03032
]
C427_2754
03400 DNA repair and recombination proteins [BR:
gps03400
]
C427_2754
Enzymes [BR:
gps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C427_2754
DNA replication proteins [BR:
gps03032
]
Prokaryotic type
DNA Topoisomerases
C427_2754
DNA repair and recombination proteins [BR:
gps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C427_2754
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AGH44863
UniProt:
K7ALB2
LinkDB
All DBs
Position
2602633..2605275
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AA seq
880 aa
AA seq
DB search
MAKHLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPHKAVGKVAPKKPAKELKLLSEK
KRATYLRDYEYKKLVDRMGIDPKNDWQVHYDVLEGKEKVVNELKKLAKNADTVYLATDLD
REGEAIAWHLRELIDEPGKDFQRVVFNEITKNAIQEAFAKPGKLNIEMVNAQQARRFLDR
VVGFMVSPLLWKKVARGLSAGRVQSVAARLVVEREREIKAFVPEEFWDLHADLNTAKKIS
LRMQVVKESGAAFKPVNKAQTDKAVSFLESASYQVVSRESRPTQSKPSAPLITSTLQQAA
STRLGFGVKKTMMMAQRLYEAGHITYMRTDSTHLGKEAVDGCRDYINENFGEKYLPENPI
KYGSKEGAQEAHEAIRPSNVLLKSEAISDVERDAQRLYELIWRQFVACQMTPAKYDASTI
RVKAGDFELTAKGRVLKFDGWTKVQNPQRKKGEEDLLLPDVKEGENLDLSSLDPKQHFTK
PVARFNEASLVKELEKRGIGRPSTYASIISTIQDRGYARIESKRFYAEKMGEIVNDRLME
NFDDLIGYDFTANMEQQLDAVAEGKASWKGVLNEFYEDFEKKLVIAEKSPEEGGMRLNQA
VPTDIACAKCERPMNVRTASTGVFLGCSGYSLPPKERCTGTMNLTSGDEVIKVEDEEELE
TEVLRSKRRCDICGTAMDSYLVDESRKLHVCGNTPTCEGIYVEKGTFKIKGYEGPLLECD
KCQSNMELKSGRFGKYFGCTNEECKNTRKLLRNGEAAPPKEDPTDLPELECVKSDAHFVL
RDGASGIFLAAHNFPKSRETRAPKVEELARFRDRISPKFYYLADAPAKDPDGSPAIVRYS
RKTKQQYVMSENEEGKATGWSAWCTDGKWIVEDKRKKPKK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacatctagtcattgtcgaatcaccggcaaaggcaaaaacgattaataaatat
ctcggcaaagattttattgttaaatctagtgtcggtcacgttcgggatcttcctcacaag
gctgtgggcaaagttgcgcctaaaaaaccagcaaaagaactcaaacttctctccgaaaaa
aagcgtgcaacctatttgcgcgattatgaatataagaaacttgttgatcgtatgggtatc
gaccctaaaaatgattggcaggtgcattacgatgtactcgaaggcaaagaaaaagttgtt
aacgaacttaaaaagttggcaaaaaatgctgacaccgtctatctcgcaacggatttggat
agggaaggggaagcgattgcttggcacttacgagagttgattgacgagccaggcaaagat
tttcagcgtgtggtatttaacgagatcactaaaaatgccattcaagaagcctttgctaag
ccaggaaaattaaacattgaaatggtgaatgcccaacaagccagacgttttctggaccgt
gttgtaggttttatggtatctccattactttggaaaaaagttgcacgaggtttgtctgcg
gggcgggtacaatcagtagctgctcgtttagttgtcgagcgcgaaagagaaataaaagcg
tttgtacctgaggaattttgggacctacatgcagatttaaataccgcaaaaaaaatcagt
ttgcggatgcaagttgtcaaagaaagtggcgcagcatttaaaccggtcaataaagctcaa
actgataaagcggtaagttttttagaaagcgctagttatcaagtggtaagtcgcgaatca
aggccaactcaaagtaaaccttctgctccactcattacctctactttacaacaagcggcg
agtacacgtttaggctttggtgtgaagaaaaccatgatgatggcacaacggttgtacgaa
gctgggcatattacctatatgcgaactgactctacccatttaggtaaagaagctgttgat
ggctgtcgtgattatattaatgaaaattttggtgaaaaatacttaccggaaaatccaatt
aaatatggtagcaaagaaggagctcaagaggcgcatgaagctattcgtccgtctaatgtg
ttacttaaatctgaagccattagtgatgtagagcgcgatgctcagcgcttatacgaatta
atttggcgccagtttgtcgcatgtcaaatgactccagcaaaatatgacgctagcacaatc
agagttaaagcgggtgattttgaattaaccgcaaaagggcgtgtattgaagtttgatggt
tggactaaagtacagaatccgcagcgtaaaaaaggcgaagaagatttattattacctgat
gtgaaagaaggcgaaaatttagatcttagctcccttgatcctaaacagcattttactaaa
cctgttgcgcgttttaatgaagcatcattggtaaaagagttagaaaaacgtggcattggt
cgtccttctacttacgccagtatcatctcaaccattcaggatagaggttatgcaagaatc
gaaagtaagcgattctatgcggaaaaaatgggtgagattgtaaacgaccgtctgatggaa
aatttcgacgatctaattggttatgattttacagccaatatggaacaacagttagatgca
gtagcagaaggaaaggcctcatggaaaggagtattaaatgagttctatgaggacttcgaa
aagaagctagttattgctgaaaaatcgcctgaagaaggcggtatgcgtttaaatcaagcc
gtacctacggatattgcttgtgcaaaatgtgaacgacccatgaatgtccgaacagctagt
acaggtgtgtttttagggtgttctggctatagcttaccccctaaagaacgctgcacaggc
accatgaatttaacttctggtgatgaagtaatcaaggttgaagatgaagaagagttagaa
accgaagtgttacgctcaaaacgacgttgtgacatttgtggtacggctatggatagttat
ttggtggatgagtctcgtaagttacatgtatgtggaaacacacccacatgtgaagggatt
tatgtggaaaaaggtacctttaagattaaagggtatgaaggcccgcttcttgaatgtgac
aagtgtcaatccaacatggagctaaaaagtggccgcttcggtaagtattttggttgtact
aatgaagagtgtaaaaacacccgtaaattacttcgaaatggcgaagctgcacctcctaaa
gaagatcccactgacttaccagagttggaatgcgtaaaatctgatgctcactttgtactc
agagatggtgcatctggcatcttcttagccgcgcataatttccctaaatcaagagaaaca
cgcgcccctaaagttgaggagcttgctcgttttagagataggatttcgcctaagttttac
tatttggccgatgcacccgctaaagaccctgatggaagtccggctatcgtgcgttacagc
cgtaaaaccaaacagcaatacgtgatgtcagaaaatgaagaaggtaaagcgactggctgg
tctgcatggtgtaccgacggcaaatggattgttgaagataagcgtaagaaacccaaaaaa
taa
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