Paraglaciecola psychrophila: C427_2812
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Entry
C427_2812 CDS
T02535
Name
(GenBank) hypothetical protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
gps
Paraglaciecola psychrophila
Pathway
gps03030
DNA replication
gps03430
Mismatch repair
gps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C427_2812
03430 Mismatch repair
C427_2812
03440 Homologous recombination
C427_2812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gps03032
]
C427_2812
03400 DNA repair and recombination proteins [BR:
gps03400
]
C427_2812
Enzymes [BR:
gps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C427_2812
DNA replication proteins [BR:
gps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C427_2812
DNA repair and recombination proteins [BR:
gps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C427_2812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
DNA_pol3_delta
AAA_22
nSTAND3
AAA_5
AAA_11
Mg_chelatase
NACHT
AAA_30
AAA_24
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AGH44921
UniProt:
K7ALG1
LinkDB
All DBs
Position
2657443..2658330
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AA seq
295 aa
AA seq
DB search
MFPWLEVTFKQLSARIAAVKLHHALLIQGPSGLGKSNFALQFAQLLLCKARQGHKVCGHC
QSCLLNAANTHPDLHVVESDKQIGVDQIRDAIKKLVSSAHMSGAKVLIIYDAHTMTESSA
NALLKTLEEPTANTFLLLTTNKPERLLPTIKSRCEKLALPLPTLDSTLAWVKTQYDADID
INFARLFSSRPLALLAELQEEQKFTYEIFSAGLDALLHKQTSAMQLAMDWHDSADKVLKW
TQYWARQQCTENVSETVWQLNLQASKVTRQLRNPGVNKTLLLTELLDKLALVKAA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgtttccttggttagaggttacttttaaacagttaagtgcacggatcgcggcagttaag
ttgcatcatgctttgcttattcaaggtccctctggtttaggtaaatcaaactttgccttg
cagtttgctcagttacttttatgtaaagctaggcaagggcataaggtgtgcggtcactgc
cagtcttgcttgttaaatgctgcgaatactcatcctgacttacatgtggtggaatcggat
aaacaaattggtgttgatcagatacgcgacgccattaaaaaattagttagctctgctcac
atgtctggggcaaaggtattgattatctatgatgcacacactatgaccgaatcaagcgcg
aatgcattactcaaaaccttagaagagcctaccgctaatacgtttttgttactcacaacg
aacaagccagaacgtttgctgccgacaattaaaagccgctgtgaaaaattagcgttacct
ttacccactttagattcgacattagcttgggtaaaaacccaatatgacgctgatattgat
atcaattttgccagattgtttagttcacgcccgctggctttattagcagaactacaagaa
gagcaaaagtttacttatgaaatatttagcgctggtttagatgctttgctgcataagcaa
accagtgccatgcaattagcaatggattggcacgatagtgcagataaagtacttaaatgg
actcaatattgggcaagacaacaatgtactgagaatgtttctgaaacagtgtggcagcta
aatttacaagcgtctaaggtgactcgacaattgcgtaaccctggtgtgaataaaacatta
ttgttaacagagctgttagataagcttgcattagtcaaggccgcataa
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