Paraglaciecola psychrophila: C427_3285
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Entry
C427_3285 CDS
T02535
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
gps
Paraglaciecola psychrophila
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gps03000
]
C427_3285
Transcription factors [BR:
gps03000
]
Prokaryotic type
Helix-turn-helix
LysR family
C427_3285
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
MarR
PBP_like_2
Phage_ORF5
Toxin-deaminase
Motif
Other DBs
NCBI-ProteinID:
AGH45394
UniProt:
K7AS12
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Position
complement(3144284..3145183)
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AA seq
299 aa
AA seq
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MYNVSFRQVQIFVCIAQSHTFAQAAEKMCLSQPALSSAIKKMESQLGGVLFSRTTRKVEL
SPEGRQFLPVVVRLMGDWQDAFSDLHNLFSLGQGKLSIAAMPSFAAGLLPGILQQFKTEF
PNIKLSVADVVMESVIKDVQAGRAEIGFSFEHKKMDGLEFHPILTDNFIAVLPANHPLSE
HQVLSWSHIALYPFVAMNKGSAIRQWIDSFMELNHLSLDIVVEASQLATLGQFVKHDLGV
SVVPALCQEQMLSKDLVCLNIHQSGLSKRVGVIRQKNGNLSSVASTFWQWTVKNISYSG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgtatcgtttcgccaggtacagatttttgtctgtattgcgcaatcccatacc
tttgctcaggctgctgagaaaatgtgtctgtctcaacccgccttatcttcggcaataaaa
aaaatggaatcacagttggggggggtattgttttcacgcaccactcgtaaagtggaatta
agcccagaaggaaggcaatttttacccgtggtcgttaggcttatgggtgattggcaagac
gcgttttcagacttacataacttattttcattaggccaaggcaagctatccatagccgca
atgccctcttttgctgctgggctgttgccgggtattttgcaacagttcaaaactgagttc
cctaacataaaattgtcagtggctgatgtggtgatggagtccgtgataaaagatgtgcaa
gcaggtagggctgaaattggcttttccttcgaacataaaaaaatggatgggttggagttt
catcccattcttacggataattttattgcggtattacccgctaatcaccccttgagcgaa
catcaagttttgtcttggtcacacattgctttgtacccttttgtagcgatgaataaaggc
tcagctattcgccaatggattgattcatttatggaattaaatcatttgtctctggatata
gtggtggaggcaagtcaacttgccaccttagggcagtttgtcaaacatgacctaggtgtg
tctgtggtaccggctttatgtcaggaacaaatgctcagcaaagacttagtttgcctgaat
attcatcagagtggtttgagtaaacgagtcggcgttattcggcaaaaaaatggaaattta
tcgtcagtggcttcaacattctggcaatggactgtgaaaaatatttcatattctggttaa
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