Paraglaciecola psychrophila: C427_3357
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Entry
C427_3357 CDS
T02535
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gps
Paraglaciecola psychrophila
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gps03016
]
C427_3357
Enzymes [BR:
gps01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C427_3357
Transfer RNA biogenesis [BR:
gps03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C427_3357
Prokaryotic type
C427_3357
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Spectrin_Anc-1_2
Motif
Other DBs
NCBI-ProteinID:
AGH45466
UniProt:
K7A728
LinkDB
All DBs
Position
complement(3207023..3207982)
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AA seq
319 aa
AA seq
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MARTRKGRAVNGIILLNKGLGLSSNHALQQVKRMFNAAKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDTDKTYKVTAKLGVRTTTSDADGEVVETHPVNVTEAQLIAACEQFKGPIKQ
VPSMFSALKHQGKPLYFYARQGIDIPREARDITIFSLSIDRFETDEVDMTVHSSKGTYIR
SLVDDIGQLLGCGAYVSKLHRTQVTDYPADKMMTMESLQALRDQIDNESADLLDDQTFTA
LDQLLMPMDSAVKTLDSAKVEQIAEGFFRNGNPVNFTGSTEYPQDTLIRVYSKDSGLFLG
VGFIDSDGKVAPKRSVVYS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaacaagaaaaggtcgtgccgttaacggcatcatattattgaataaaggccta
ggcctgtcgtctaatcatgcactgcaacaagttaaacgcatgtttaatgccgcgaaagca
gggcataccggtgctttagatccactggcaacaggcatgcttccaatttgtttaggtgaa
gcgactaagttttctcagtttttattggacacagataaaacttataaagtaacagctaag
cttggagtgcgcactacgacttcagatgcagatggagaggtagtagaaactcatcctgtc
aatgtaactgaagcacaattgattgctgcctgtgagcagtttaaagggcccattaaacaa
gtaccctctatgttttcagcattaaaacatcaaggcaaacctttatatttctatgctcgc
caaggcattgatattcccagagaagctcgtgacatcactatatttagtctatccattgat
agatttgaaacggatgaagttgatatgactgtacatagcagtaaaggtacttatattcgt
tccttagtggatgatattggtcagcttttaggctgtggtgcttatgtgagtaagttacac
cgtacccaagtgactgattatccagcggataaaatgatgacaatggagtcattacaagca
ctcagggaccaaatagataacgaatcagcagatttattggatgaccaaacttttactgcc
ttggatcaattattgatgcctatggactctgcagttaaaacccttgattcagctaaagta
gaacaaattgctgaaggttttttcagaaatggtaatcctgttaactttactggctccaca
gaatatccccaagacacattaatccgagtgtatagcaaggatagtggattgtttttaggc
gtggggtttattgactctgacggcaaagttgcaccaaaacgctcggttgtttatagctaa
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