Paraglaciecola psychrophila: C427_3402
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Entry
C427_3402 CDS
T02535
Name
(GenBank) exonuclase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gps
Paraglaciecola psychrophila
Pathway
gps03030
DNA replication
gps03430
Mismatch repair
gps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C427_3402
03430 Mismatch repair
C427_3402
03440 Homologous recombination
C427_3402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gps03032
]
C427_3402
03400 DNA repair and recombination proteins [BR:
gps03400
]
C427_3402
Enzymes [BR:
gps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C427_3402
DNA replication proteins [BR:
gps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C427_3402
DNA repair and recombination proteins [BR:
gps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C427_3402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AGH45511
UniProt:
K6YZH9
LinkDB
All DBs
Position
complement(3259727..3260401)
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AA seq
224 aa
AA seq
DB search
MFLNSLFGYEARRKRLLKKVPSGALHDFLSVPFPSEATSLSELPILSVDFETTGLNAMSD
KLLSVGFVSIDKRQIKLGSCYHQIINTEHRLDADNVIIHHITDQQKSQGKSLQVVVEALL
KALAGKVMLVHFARIEKQFLRQACLELYGVSPPLMILDTLAMAKRKLDRSDISYDPQELR
LSALRHKHNLPNHFAHNALSDAIATAELLLVQQKTGATKLKDLL
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
ttgtttctcaatagtctattcggttacgaagcgcgcagaaaacggcttttaaaaaaagtg
cctagtggggcgctccatgattttttatccgtgccgtttcctagcgaagcaacatcttta
tccgagctacctattctgtctgtagactttgaaacaacggggttaaatgcaatgtctgac
aaactgcttagcgttggttttgtcagcattgataaacgccaaattaaactaggcagttgt
taccatcaaattattaacactgaacaccgccttgatgcagacaatgtgattattcatcac
attactgaccaacaaaagtctcaaggtaaatctttacaggttgtcgtcgaagcgttatta
aaagccttagcagggaaggtgatgttggtacattttgcccgaattgagaagcaattttta
aggcaagcttgcctagaattatatggcgtgtccccccctttgatgatcttggataccctg
gcgatggcgaaacgtaagcttgatcgaagtgacatttcttacgaccctcaagaattgagg
ttgtctgctttacggcacaaacataatttaccgaatcactttgctcataatgcacttagc
gatgcgattgctactgctgaattacttctggtacagcaaaaaacaggcgctacaaagcta
aaggatttattataa
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