Paraglaciecola psychrophila: C427_3484
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Entry
C427_3484 CDS
T02535
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
gps
Paraglaciecola psychrophila
Pathway
gps00550
Peptidoglycan biosynthesis
gps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C427_3484
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gps01002
]
C427_3484
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gps01011
]
C427_3484
Enzymes [BR:
gps01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C427_3484
Peptidases and inhibitors [BR:
gps01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
C427_3484
Peptidoglycan biosynthesis and degradation proteins [BR:
gps01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
C427_3484
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
CytoC_RC
Motif
Other DBs
NCBI-ProteinID:
AGH45593
UniProt:
K6ZJC8
LinkDB
All DBs
Position
3342572..3343615
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AA seq
347 aa
AA seq
DB search
MDFQTGNVIAEQNADIQIPPASLTKMMTSYVIGIELLNGNIKDSDLVTISENAWAKNFPD
SSKMFIEVGKKISVADLNRGIIVQSGNDACVAMAEHIAGSEGAFASMMNMHAEKLGMTST
YFVNSHGLHDAQHFTTPRDMAILSAALIRDVPEEYAIYAEKEFTFNDIKQYNRNGLLWDK
SLNVDGIKTGHTSDAGYSLITSAYQGDMRLISVVMGTDSERARKVENKKLLKYGFRFFET
ITPYKAGDSFVSHRIFMGDKETVDLGILQDTPINIPRGQSKNLKANFKLDKDLQAPIAKG
EVVGKLYLQIEGEDIAEYPLVALQEVKEGGFIDRMVDFVKLRLGFDS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggatttccaaacgggtaatgttatcgcagagcaaaatgctgatattcagatccctccc
gctagcttaactaaaatgatgacaagctatgtgattggcatagagcttctaaatggcaat
atcaaagactccgatttggtgactatttctgaaaacgcctgggctaaaaactttccagac
tcctcaaagatgtttatcgaagtaggtaaaaaaatatctgtagcagatctaaatcgcggt
attattgtgcagtcaggtaatgatgcctgtgtcgccatggcagaacatattgctggtagt
gaaggtgcctttgccagcatgatgaatatgcatgcagaaaagctaggtatgacatcaact
tattttgtgaacagtcatggtttacatgatgcccagcatttcaccacacccagagatatg
gcaatcttatcagcagcattgatacgtgacgttccagaagaatatgctatctatgctgaa
aaagaatttactttcaacgatattaaacaatacaaccgtaatggcctattatgggataaa
agcctaaatgttgacggtataaaaaccggccacacatcagatgcaggttacagcttgatt
acatctgcgtaccaaggcgacatgcgtttaatctcagtggttatgggcacagacagtgaa
cgggctcgtaaggttgaaaacaaaaaattactcaagtatgggtttcgtttctttgaaact
attaccccttataaagccggtgacagctttgtttcacaccgtatttttatgggtgacaaa
gaaacggtagaccttggtatattacaagatacccccatcaatatacctcgaggtcaaagc
aaaaatttaaaagctaactttaagttagacaaagacttgcaggcacctattgctaaaggt
gaagtagtaggcaaactctatctgcaaattgagggcgaagatattgctgaatacccatta
gtggctctacaagaagtcaaagaaggtggatttattgaccgtatggttgattttgttaaa
ttacgacttggctttgatagttaa
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