Paraglaciecola psychrophila: C427_3671
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Entry
C427_3671 CDS
T02535
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
KO
K10943
two-component system, response regulator FlrC
Organism
gps
Paraglaciecola psychrophila
Pathway
gps02020
Two-component system
gps02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C427_3671
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C427_3671
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
gps02022
]
C427_3671
02035 Bacterial motility proteins [BR:
gps02035
]
C427_3671
Two-component system [BR:
gps02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
C427_3671
Bacterial motility proteins [BR:
gps02035
]
Flagellar system
Flagellar assembly proteins
Others
C427_3671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
HTH_30
AAA_19
Mg_chelatase
AAA_16
MerR
HTH_20
AAA
HTH_24
RNA12
HTH_23
MCM
AAA_7
HTH_28
DUF2089
NB-ARC
HTH_11
HTH_10
nSTAND3
Sigma70_r4_2
FleQ
AAA_3
Motif
Other DBs
NCBI-ProteinID:
AGH45779
UniProt:
K7AQK3
LinkDB
All DBs
Position
complement(3521663..3523015)
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AA seq
450 aa
AA seq
DB search
MSQAKVLIVEDDAGLREALVDTLLLGGYQVIDADSGEQAMVKLSEQSVDLVVSDIQMGGM
SGLTLLKNIKNKYPNLAILLMTAYATIDDAVQAMRDGATDYLSKPFAPEVLLNLVGRYAP
AQKVESRTPVVDDPSSLQLLELAKKVARSEATVMVLGPSGSGKEVLARFIHDQSNRSQQT
FVAINCAAIPENMLEATLFGYEKGAFTGAIQACPGKFEQAQGGTILLDEISEMDLNLQVK
LLRVLQEKEVERLGGRKTIALDVRIIATSNRNLKQTVDAGEFREDLYYRLNVFPLTWLPL
DKRAGDIIPLAEHLIERHCQKQGNIISKLTAAGRSKLLQHNWPGNVRELENVIQRALILS
DCNQIDAQDLMIEQDISALTQSSHLDFEKVEDDNSKLGSELRQQEHQIILDTLQSCKGRR
KDVAERLGISPRTLRYKLAKMREVGIELPA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagctaaagtactaatagtagaggatgacgcgggcctaagagaggcattagtc
gacaccttattgctgggaggttatcaagtcattgatgccgacagtggcgagcaagccatg
gttaagttgtctgaacaatcagtcgacttagtggtaagtgatatccaaatgggcggtatg
agtggtctaacattactcaaaaatataaaaaataaatacccaaatttagccatattgtta
atgaccgcctacgccactattgatgatgctgttcaggcaatgcgtgatggagcaaccgat
tatttatcaaagccttttgctcctgaagtgctgcttaatttggttggtcgctatgcacca
gcgcaaaaagtagaatcacggacaccagtagtagatgacccaagcagcttacaattactg
gaattagccaaaaaagtagctagatcagaggcaaccgttatggttttagggcccagcgga
tcaggtaaggaagtattagcacgttttattcatgaccagtccaatcgtagccaacaaacc
tttgtggcaatcaactgtgcggctataccggaaaacatgcttgaagcaacactttttggt
tacgaaaaaggtgcctttacaggggcgatacaagcttgtcctggaaaatttgaacaggct
caaggtggcaccattttacttgatgaaatcagtgagatggacctaaatcttcaagttaag
ttattacgggtattgcaggagaaagaggtcgaaagattaggcggccgtaaaactattgct
ttagatgtcagaataatagcgaccagcaaccgtaacttaaaacaaactgtggatgcgggt
gaatttagagaagacctatactatcgcctgaatgtgtttccactcacctggttgccgctt
gataaaagagccggggatattatccctttagccgaacatttaattgaacgtcattgtcaa
aaacagggcaatatcatatctaaattgacggcggcaggtcgcagtaaattattacagcat
aattggcctgggaatgtgcgagagcttgaaaatgtgatccaacgtgcgcttattttatct
gactgtaaccaaattgatgcccaagacttaatgattgagcaagatatatcggcactaact
cagtcttctcatttagattttgaaaaagttgaagacgataacagtaagttaggatctgaa
ctgcggcaacaagaacatcaaatcattcttgatactttacaaagttgcaaaggtcggcgt
aaagatgtcgctgaaagattaggcataagtcccagaaccttgcgttacaagcttgccaaa
atgcgcgaagtgggtattgaactacctgcttag
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