Paraglaciecola psychrophila: C427_3785
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Entry
C427_3785 CDS
T02535
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
gps
Paraglaciecola psychrophila
Pathway
gps03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C427_3785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gps03400
]
C427_3785
Enzymes [BR:
gps01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
C427_3785
DNA repair and recombination proteins [BR:
gps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C427_3785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF3526
Motif
Other DBs
NCBI-ProteinID:
AGH45893
UniProt:
K6YXP5
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All DBs
Position
3637712..3639055
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AA seq
447 aa
AA seq
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MFTVQTSAKNILTVSKLNRLARSVLESEIGQIWLSAEISNFVAASSGHWYFTLKDDRAQV
KGAMFKGANRKVHQKPKEGDKVLVKANISLYEPRGDYQIIVEHMEPEGEGQLKQQFEMLK
RQLASEGIFAQDYKKPIPETVLKVGIVTSPTGAALHDILTVLQRRNPAIEVIIYPSQVQG
DSAVSLICAAITQANLRKEVDVLIVGRGGGSLEDLWCFNSELVARKIFASSIPIISAVGH
EIDVSIADFVADMRAPTPSAAAELVSQDQSTLHNKTLALQDKLIKAFSRLQQVLLHQHQT
LNQRLLQNHPQKQLEQKSQYVDQLQASLQSAFKQKLTQAKQQQQHIHSRLSLSSPQKLLQ
RHQIRLQDLQTRLQRSCQQLIENKQQKLLNNMHLLDTVSPLATLARGYSISFKQGKIVKT
TQQVQIGDVLVTRLEDGEVYSEINQIK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtttactgtccaaacctcagcaaaaaacatccttactgttagcaaactcaatcgttta
gcacgctcggttttagaatctgaaattggtcaaatttggctttcagctgaaatttcaaat
tttgttgcggctagctctggtcattggtatttcaccctgaaagatgatcgtgcgcaggtc
aaaggagcaatgtttaaaggtgcaaaccgcaaagtgcatcaaaaacctaaagaaggtgac
aaagttttagttaaagccaacatcagcttgtatgagcccagaggtgattaccaaatcatc
gttgagcatatggaaccagaaggtgaagggcaacttaaacaacaattcgaaatgttgaaa
cggcaattggcctcagaaggcatttttgcacaagattataaaaaaccaatacccgaaact
gtactaaaagtaggtattgttacctcacccacaggtgccgctttacatgatattttgacc
gttctgcaacgccgtaaccctgccattgaggtgattatttatccgagtcaagtccaaggt
gatagcgcagtttctcttatttgtgcggcgattactcaagctaacctcagaaaagaagta
gatgtattaattgttggcagaggtggcggctctttagaagatctctggtgctttaacagt
gaactggtggccagaaaaatattcgcctcttcaattcccataatcagtgctgtgggtcac
gaaatagatgtgagcattgctgattttgtagcggatatgcgtgccccaacaccttcagca
gccgccgagctggtcagtcaagatcagtcaactttgcacaataaaacccttgccctacaa
gataagctaattaaagcttttagtcgtttgcaacaagtactacttcatcagcatcagact
ttaaatcaacgattactgcaaaatcatccacaaaagcaactagaacaaaagagtcagtat
gtcgatcaactacaagcttcgttgcaatctgcattcaaacaaaaactgactcaggcaaaa
caacaacaacagcatatacatagtcgcctttctttatcttcgccccaaaaactgctgcaa
cgtcatcaaataaggttgcaggacctgcaaactagactacaaagaagctgtcaacagtta
atagaaaacaaacagcaaaagttacttaataatatgcatctattagacacagtaagccca
ttagccacattggcaaggggttacagcattagttttaagcagggaaaaatagttaaaacc
actcaacaagttcaaattggggatgtcttagtgactcgtttagaagacggagaagtatac
agtgaaatcaatcagataaagtag
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