Paraglaciecola psychrophila: C427_3890
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Entry
C427_3890 CDS
T02535
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
gps
Paraglaciecola psychrophila
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gps03400
]
C427_3890
DNA repair and recombination proteins [BR:
gps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C427_3890
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
RecA
AAA_14
SLFN-g3_helicase
Zeta_toxin
AAA_22
KdpD
nSTAND3
GvpD_P-loop
Rad51
AAA_16
ABC_tran
AAA_24
NTPase_1
Viral_helicase1
cobW
FtsK_SpoIIIE
DUF7125
DAP3
AAA_29
AAA_18
divDNAB
Motif
Other DBs
NCBI-ProteinID:
AGH45995
UniProt:
K7AAA6
LinkDB
All DBs
Position
complement(3737767..3739131)
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AA seq
454 aa
AA seq
DB search
MAKRKTAYVCSDCGAEYPRWQGQCNDCNTWNTITEFVVSSISNSTSRNTGGYSGQTQAKV
ESLASIDLQALPRFESGYKELDRVLGGGIVPGSAILIGGSPGAGKSTMLLQVMCQMASKK
NALYVTGEESLQQVAMRAERLGLPKDKLKLLAETNIEVICDLALQHKPELMVIDSIQVMQ
VPDVQSAPGSVSQVRESAAYLTRFAKQHHIAMFLVGHVTKDGSLAGPKVLEHCIDCSMML
EGESDSRYRTLRSQKNRFGAVNELGVFAMTEKGLKEVTNPSAIFLSRDEQQSPGSIVMVV
WEGSRPLLVEIQALVDYSQMANPRRVAVGLDQNRLAMLLAVLHRHGNVQMNDQDVFANVV
GGVKVNETSADLALLLSIVSSFQNKILDKKLIAFGEVGLAGEIRPVPNGSERISEAAKHG
FKRAIVPKANVPKQRIAGIEIVGVSSLSEALEAI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacgcaaaactgcttatgtatgctctgattgtggagctgaatatccccgttgg
caaggacaatgtaatgattgcaacacttggaacactattaccgagtttgtggtgtcttca
attagcaattcaactagccgtaatacaggtgggtattcaggtcaaactcaagccaaagta
gagtctttagccagcatcgatttgcaggctttacccagattcgagtcgggttataaagag
cttgatcgcgttttgggtggtggtatcgtgccaggttcggctattttgataggcggttca
ccaggtgcgggtaaaagcactatgttgttgcaggtcatgtgtcaaatggcaagtaagaaa
aatgcgctttatgtcacgggtgaggaatcattgcaacaagttgcaatgcgtgcggaacga
cttggcttacccaaagataagttgaaattgttggctgaaaccaatattgaagtgatttgt
gatctcgccttacaacataagcctgaactcatggtgattgactctattcaagtgatgcag
gtacctgatgtgcagtcggctccgggcagtgtgtcgcaagtacgcgaaagtgcagcttat
ttgactcgctttgccaaacagcatcatattgccatgtttttagtcgggcatgtaaccaaa
gatggcagtttagcaggccctaaagtattagagcattgtattgactgttcgatgatgctt
gagggtgaaagtgatagtcgttatcggactttaagaagtcaaaaaaatcgatttggcgcg
gttaatgaacttggtgtgtttgctatgaccgaaaaaggtctaaaagaagtcactaatcct
tcagctatttttctcagtcgtgatgaacagcaatctccaggcagtatcgttatggtggtc
tgggaggggtcgcggccactgctggtagagatccaggctttagtggactattcacagatg
gcaaacccaagacgcgtagctgtagggcttgatcaaaaccgcttggcaatgttgttggct
gtgttgcaccgacatggcaatgtacaaatgaacgaccaggatgtgtttgcgaacgtggtg
ggtggggtaaaagtaaatgaaaccagtgctgacttggctttgttgttatccatcgtgtct
agttttcaaaataaaatcctagataaaaaattaattgcttttggagaagtcggcttagcg
ggtgaaatcaggcctgtacccaatggttcagaaagaataagtgaagcggctaagcatggt
tttaagcgggcgatagtacctaaagccaatgtacctaaacagcgcatagccgggattgaa
attgttggtgtgtcgagcctgtcagaagcccttgaagcgatataa
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