Paraglaciecola psychrophila: C427_4052
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Entry
C427_4052 CDS
T02535
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
gps
Paraglaciecola psychrophila
Pathway
gps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C427_4052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gps03400
]
C427_4052
DNA repair and recombination proteins [BR:
gps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C427_4052
RecFOR pathway proteins
C427_4052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
HHH
RecR_HhH
IMS_HHH
HHH_8
Transposase_20
Cdd1
Motif
Other DBs
NCBI-ProteinID:
AGH46157
UniProt:
K7A4B1
LinkDB
All DBs
Position
complement(3892883..3893506)
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AA seq
207 aa
AA seq
DB search
MIGNIRGILIEKQPPEILIEAGGVGYEVQVPMTSFYQLPEIGQEANLCIHFVVREDAQLL
FGFANKQERAVFRELIKASGVGPKLALTILSGMNAQQFMQCVSLEDVTGLTKLPGVGKKT
AERLVIEMRDRLSKLAKDQGYAQTVHLTPDLPVENTFVQRTDAKEEALSALIALGYKPPQ
AMRVINAVYKQDISSEALIREALRAMA
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgataggtaatattcgtggcatattaattgaaaagcagccacctgagattctgatagaa
gcggggggcgtgggttacgaagtgcaggtacctatgaccagtttttatcaattacccgaa
atcggtcaagaagccaatctatgtattcattttgtagtgcgtgaagatgcacagctgttg
tttggttttgccaataaacaagaacgtgccgtatttcgtgaactaatcaaagccagcgga
gtaggtccaaagttagcactcactatattgtcaggtatgaacgcacaacaatttatgcaa
tgtgtcagtctggaagatgttaccggtttaaccaagctacctggtgtcggcaaaaaaaca
gcggaacgcttagtcattgaaatgcgcgatagattaagcaaattagccaaagatcagggc
tatgcgcaaaccgtgcatctgacgcccgatttacctgttgagaacacctttgtacaacgt
actgatgcgaaagaagaagccttaagcgcattgattgctttaggatacaaacccccacag
gcgatgagagtgattaacgcggtgtataaacaagatatcagcagcgaagccttgatccga
gaagctctccgagcaatggcttaa
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