Paraglaciecola psychrophila: C427_4519
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Entry
C427_4519 CDS
T02535
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gps
Paraglaciecola psychrophila
Pathway
gps00061
Fatty acid biosynthesis
gps00071
Fatty acid degradation
gps01100
Metabolic pathways
gps01212
Fatty acid metabolism
gps02024
Quorum sensing
gps04146
Peroxisome
Module
gps_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C427_4519
00071 Fatty acid degradation
C427_4519
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C427_4519
09145 Cellular community - prokaryotes
02024 Quorum sensing
C427_4519
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gps01004
]
C427_4519
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gps04147
]
C427_4519
Enzymes [BR:
gps01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
C427_4519
Lipid biosynthesis proteins [BR:
gps01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
C427_4519
Exosome [BR:
gps04147
]
Exosomal proteins
Exosomal proteins of breast milk
C427_4519
Exosomal proteins of breast cancer cells
C427_4519
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AGH46618
UniProt:
K7ADC0
LinkDB
All DBs
Position
complement(4367390..4369027)
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AA seq
545 aa
AA seq
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MSLKTPLEMFYQWEQTHPDTIYLKQPIDGVTKDFTWRETGQQARKVAESLLVMNLPKGSH
IAILSKNCAEWFITDLAIMLAGHVSVPIYSTAGEKTIKYVLDHAKCPVIFVGKLDNTEKQ
VAAIDDGIVKLAFPYPNIPADKQWDELLQTDPFLGKPIPALDSIMSIVYTSGSTGNPKGV
VHNYESMCWAASNSLNELGVDQNDRILSYLPLAHITERVLVEIASFYSGSRIDFIESLDT
FARDVRATQPTLFISVPRLWTRFQMGVLANMPQKKLDFLLRVPIVGGIVSKKIRTKLGLG
QARLCASGSAPIPATTLEWFRKIGINISEGWGMTENSAYGTCCVPFRADKLGSIGRAYSG
VDIRIAEEGEIQVKGPCNMKEYYLEPEKTAEVMTEDGYLKTGDKGSIDSEGYIKITGRLK
EIFKTSKGKYIAPVPIESKLMANSSIEQVCVTGSQLKQPIGLVVLSVEALKLPSAEIEMS
LLATLNEVNNTLESHAVLDCLVVMKDEWTVDNGLLTPTLKVKRHNLEEHYKDLINGQLNG
KIVRQ
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcactaaaaacacccttagaaatgttttatcaatgggaacagactcatcccgatact
atttatttaaaacagcctattgatggagttaccaaagattttacttggcgcgaaactggc
caacaagctcgaaaggtggctgaaagtttactcgttatgaacttacctaaaggtagtcat
attgctattttgtcaaaaaattgcgctgagtggtttattacagatttagccattatgcta
gcagggcatgtgtcggtgcctatatattcgactgctggtgaaaagactattaaatatgtt
ttggatcacgctaagtgcccagtgatttttgtggggaagttggacaacacggaaaaacaa
gtcgctgctattgacgatgggattgtaaaactagcgtttccttatcctaatattcctgct
gataaacagtgggatgaattattacaaacagatccattcctcggcaagcctattcccgct
ttagattcaattatgtctattgtttacacatctggcagtactggtaatcccaaaggcgtg
gtgcacaattacgaatcaatgtgttgggctgcatcaaactcattaaatgaattaggtgtg
gaccaaaatgatcgaattctcagttatctgcctttagcacatattactgaaagagtttta
gttgagatcgcaagtttttattccggatctcgtattgattttatcgagtctttagatacc
tttgcccgcgatgttagagcaacgcagcccacattgtttatttctgtccctcgtttatgg
acacgttttcaaatgggcgttttagccaacatgccacagaaaaaactggatttcttgctg
cgagttccaatagtgggaggcatcgttagtaaaaagatacgtactaaattaggtcttggg
caagcaaggctatgtgccagtggttcagcacccatacctgctactacactagaatggttc
agaaaaattggtattaatatttctgaaggttgggggatgactgaaaatagtgcatatggc
acttgttgtgtaccttttcgtgctgacaaactaggctcaattggccgtgcttattcaggt
gtggacatacgcatagctgaagaaggtgaaattcaagttaaagggccttgtaatatgaaa
gagtattatttggagccagaaaaaaccgcagaagtgatgactgaagatggatatctaaaa
acaggggataaaggctctattgacagtgagggttacatcaaaattactggtcgcttaaaa
gaaatctttaaaacatcgaaaggtaagtatattgcaccggtaccaattgaatcaaaactg
atggctaattcctctattgaacaagtgtgtgtcactggttcgcaattaaaacaaccgatt
ggtttggtggttttgtctgtagaagcgcttaagttaccatcagcagaaattgagatgagt
ttgttggcaaccttaaatgaagtaaataacacacttgaaagtcatgcggtgcttgactgt
ttagtagttatgaaagatgaatggactgtagataatggccttttgactcccactctaaaa
gttaaacgacataatctagaagaacattataaagacctcattaatggtcagttaaatgga
aaaattgtaaggcaatag
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