Paraglaciecola psychrophila: C427_4958
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Entry
C427_4958 CDS
T02535
Name
(GenBank) RNA polymerase subunit sigma 28
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
gps
Paraglaciecola psychrophila
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gps03021
]
C427_4958
Transcription machinery [BR:
gps03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C427_4958
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
IF2_N
Calici_PP_N
Motif
Other DBs
NCBI-ProteinID:
AGH47057
UniProt:
K6ZWC4
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All DBs
Position
4785069..4786052
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AA seq
327 aa
AA seq
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MGQEKTVVLEVNAFSDIEDAVERELVKADKKAEEQLEDILANKEDKPKNLDVTQLYLGEI
GFSPLLSAEEEVYFSRRALKGDEASRKRMIVSNLRLVVKIARRYNNRGLALLDLIEEGNL
GLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAAREL
SQMLDHEPTPQEIAESLDKPVRDVIKMLRLNERITSVDTPIGGENDKVLLDVIADNKGHG
PEEDLQDSDIKLNIIKWLEDLNPKQREVLARRFGLLGHEPSTLEDVGLEIGLTRERVRQI
QVEALRRLRDMLGHKGLDLEALFNKLT
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaagaaaaaacagttgtattggaagttaatgctttcagcgatattgaagatgca
gtagagcgagaacttgtcaaggccgataaaaaagccgaagaacagttagaagatattcta
gctaataaagaagataaacccaaaaacctcgatgtaactcagttgtatttaggcgaaata
gggttctcccccttattatccgcagaagaagaggtgtatttttcacgccgcgccttaaaa
ggtgatgaagcatctcgaaaacgaatgattgtcagtaatttgcgtttagtagtcaaaatc
gcgaggcgttacaacaatcgtggtttggcattacttgatttaatcgaagaaggaaattta
ggtcttattcgtgctgtcgaaaaatttgatcctgagcgaggtttcagattctctacttat
gccacttggtggattagacaaaccattgaacgtgcaattatgaaccaaacccgcacgatt
cgtttacctattcatgtagtaaaagaactcaatgtttatctgcgtgcagctagagaactt
tctcaaatgctcgatcatgaacctaccccgcaagaaattgctgaatcgttagataaacct
gttcgcgacgtcatcaaaatgttgcgtttaaacgaaagaataacctctgttgatacccct
ataggtggtgagaacgacaaggttttactggatgttatagctgataacaagggccatggc
cctgaagaagatttacaagactcagacatcaaactaaatatcataaaatggttggaagat
cttaaccctaagcaacgtgaagtgttagcaagacgctttgggctgttaggtcacgaacct
tccacccttgaggatgttgggttagaaattgggcttacccgtgaaagagttcgtcaaatt
caagtggaggctttgcgacgcttgagagacatgttgggccacaaaggtttagatttagaa
gctttattcaataaacttacttag
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