Paraglaciecola psychrophila: C427_4988
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Entry
C427_4988 CDS
T02535
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gps
Paraglaciecola psychrophila
Pathway
gps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C427_4988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gps03019
]
C427_4988
03110 Chaperones and folding catalysts [BR:
gps03110
]
C427_4988
03029 Mitochondrial biogenesis [BR:
gps03029
]
C427_4988
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gps04147
]
C427_4988
Enzymes [BR:
gps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
C427_4988
Messenger RNA biogenesis [BR:
gps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C427_4988
Chaperones and folding catalysts [BR:
gps03110
]
Heat shock proteins
HSP60 / Chaperonin
C427_4988
Mitochondrial biogenesis [BR:
gps03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
C427_4988
Exosome [BR:
gps04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C427_4988
Exosomal proteins of other body fluids (saliva and urine)
C427_4988
Exosomal proteins of breast cancer cells
C427_4988
Exosomal proteins of colorectal cancer cells
C427_4988
Exosomal proteins of bladder cancer cells
C427_4988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AGH47087
UniProt:
K6ZW98
LinkDB
All DBs
Position
4804869..4806506
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEVRFSDDARVKMLAGVNILANAVKVTLGPKGRHVVLEKSFGAPTITKDGVSVAKEI
ELEDRFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGI
DKAIVVAVKELQALSVPCADSKAIAQVGTISANSDVEVGDLIAEAMDKVGKEGVITVEEG
QSLQNELDVVEGMQFDRGYLSPYFMNNQENGTVELDNPYMLLVDKKITNIRELLPTLEAV
AKASKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKVTLEDLGTAKRVVINKDNTTIVDGAGEEEMIKGRVAQIRAQIEESTSDY
DKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVPGGGVALV
RAASKMVDLKGDNEDQTHGITLALRAMEAPLRQIASNAGAEASVVTNAVKNGEGNFGYNA
ANDTYGDMIEMGILDPTKVVRSALQFAASIASLMITTECMIAEAPKTDAPGMPDMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagttcgtttttctgatgacgctcgagtaaaaatgttagccggtgtc
aacatccttgctaacgcagtaaaagtaactttaggtcctaaaggtcgtcacgtggtttta
gaaaaatcatttggtgcacctaccatcactaaagatggtgtatctgtagccaaagaaatc
gaattggaagacagattcgaaaatatgggtgcacagatggttaaagaagtagcgtctaaa
gcaaatgacgaagccggtgacggtactactactgcaactgtattggctcaagctattgtg
accgaaggtttgaaagcagttgctgccggtatgaacccaatggatcttaaacgcggcatc
gacaaagctattgttgttgcagtaaaagaattacaagccttatctgtaccttgtgctgat
agcaaagctatcgcccaagtaggtactatctctgcaaactctgacgttgaagtcggcgac
cttatcgctgaagcaatggataaagtaggcaaagaaggcgtaattacagttgaagaaggc
cagtctctacaaaacgaattagacgttgtagaaggtatgcaattcgaccgtggttatttg
tctccttacttcatgaacaaccaagaaaacgggacagttgaactagacaacccatacatg
cttttggttgataaaaaaattaccaacatacgtgaattactacctacattagaagcggtt
gcaaaggcatctaagcctttgttgattattgctgaagatgttgaaggagaagcactagct
accttagtagtaaacaacatgcgcggtatcgttaaagtagcagcggttaaagcacctggt
tttggtgaccgtcgtaaagctatgttgcaagacattgcaacacttactggtggtacagtg
atttctgaagaaatcggcttagaacttgaaaaagtaacactagaagatcttggtacagct
aaacgtgttgtgatcaacaaagacaacaccactattgtagatggtgctggcgaagaggag
atgattaaaggtcgtgttgcgcaaattcgtgcacagattgaagaatctacttctgactac
gacaaagaaaaacttcaagagcgtctagctaaattagctggcggtgttgcagttatcaag
gttggcgcagccactgaagtcgaaatgaaagagaaaaaagaccgtgttgaagatgcactt
catgcaacacgtgctgcagtagaagaaggtgttgtacctggcggtggtgttgctctagtt
cgtgcggcctctaaaatggttgacttaaaaggcgacaacgaagaccaaactcacggtatt
acactagcacttcgtgcaatggaagcgccattacgtcaaatcgcttctaatgctggcgca
gaagcttctgttgtgactaacgcagtgaagaatggcgaaggcaacttcggttataacgct
gccaacgacacatacggcgatatgatagagatgggtattctagatcctactaaagtggtt
cgttctgcattgcagttcgccgcatcaatcgcaagtttgatgatcaccacagaatgtatg
attgccgaagctccaaaaactgatgcacctggcatgcctgacatgggcggaatgggtggc
atgggcggtatgatgtaa
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