Paraglaciecola psychrophila: C427_5341
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Entry
C427_5341 CDS
T02535
Symbol
rtxB
Name
(GenBank) toxin secretion ATP-binding protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
gps
Paraglaciecola psychrophila
Pathway
gps02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C427_5341 (rtxB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gps02000
]
C427_5341 (rtxB)
02044 Secretion system [BR:
gps02044
]
C427_5341 (rtxB)
Transporters [BR:
gps02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
C427_5341 (rtxB)
Secretion system [BR:
gps02044
]
Type I secretion system
Adhesin protein transporter
C427_5341 (rtxB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
Peptidase_C39
SMC_N
AAA_15
AAA_13
AAA_29
AAA_22
AAA_23
nSTAND3
AAA_24
DUF87
MMR_HSR1
NB-ARC
NACHT
Motif
Other DBs
NCBI-ProteinID:
AGH47438
UniProt:
K7A228
LinkDB
All DBs
Position
complement(5138401..5140575)
Genome browser
AA seq
724 aa
AA seq
DB search
MQSSAQPSSQWTINASQRLTSDPLLDCLVSLTEHFGDPCSAEALTAGLPVTASYLTPELL
PQAASRAGLSAKLVRKGLNELPSMLLPCILMLKDKQACVLQELNLEKNRAIVTLPETGGE
EHLTIEELESNFVGYLFLIKQQYRGDSNFDVYINDSKKHWLWQHLKDATPIYRDVIIASV
MVNFFALVSPLFVMNIYDKVLPNLAFESLWVLAIGASVAYIFDFILKQLRGYLIDVAGKK
VDIEVSSKLFAKVVGIPLEKRAPSIGGMAKQITEFDNVREFFSSATITALVDLPFALLFM
FCIWLVAGDLALFPIVASLLIIGYTILKQPKLRAAIEESNKFSSLRHGHLIECLGALESI
KANGAEGVVLNAWQQMIGHTSSWLLMSKMITNSVINFASFMVQISIIGVVVLGVYRVSDN
LISMGGIIAAVMLTGRAISPVAKLAGLMTRSSQTMSALRQLDNLMEQEGEFENKAHLASR
PKLVGNICAESVSFTYPDTKNPALQTMSIDIKQGEKIAIVGRNGSGKTTLAKLLLGLYQP
TAGNIQFDGLNHNQIHPSDLRRNIGYLPQDITLFHGTIRDNILFGTRQVTEYQLIRAVQL
SGVNAFTDHNTQGLDQQVGENGSTLSRGQRQSIALARAILNTPQILLLDEPTASLDARAE
QQFIKFISATARDRTLLLITHKMDLLSLVDRIIVLEKGKLVMDGPKDVVLEKLKGGKGNP
VVNL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgcaatcttcggcgcaaccctctagccagtggacaatcaacgcttcgcagcgcttaacc
tctgatcctttattagactgcttagtgtcattaaccgagcactttggcgatccctgctcc
gctgaagccttaaccgcggggctaccggttactgccagttatctgacacctgaactgcta
ccccaagctgcatcacgggctggactcagtgccaagctggtgcgtaaaggattaaacgag
ttaccttccatgttgttaccctgcatcttgatgctgaaagataagcaggcttgtgtatta
caagagctcaatctagaaaaaaatagagcgattgtcactttgcctgaaacaggaggggaa
gaacacctaaccattgaagaattggaatccaattttgttggttatttatttctcatcaag
cagcaatatcgtggtgacagcaattttgatgtttatattaatgactccaaaaaacattgg
ttatggcaacatttaaaagatgcgactcctatttacagagacgtaattatcgcgtctgtc
atggtgaacttttttgctttagtctcgccgctttttgtgatgaatatctatgacaaagtg
ttgccaaacttagcttttgagtctttatgggtgttagctattggcgcaagtgtggcttat
atatttgatttcattttaaaacaattacgaggctatttgattgatgtagctgggaaaaaa
gtggatatagaggtctcctcaaaattattcgctaaagtggtgggtataccactggaaaag
cgggcgcctagtatcggggggatggctaaacaaataactgagttcgataacgtaagagag
tttttttcatcggctactataaccgctctagttgatttaccttttgctctactgtttatg
ttttgtatttggctagtggccggagatttagccttatttccaatagtggcttctttacta
attattggctatacgattttaaaacagcccaaactgcgtgccgctattgaagaaagtaat
aaattttcaagtttacgccatgggcacttgattgagtgtttaggtgcgttagagtcgatt
aaggctaatggtgccgaaggtgtggtactaaatgcctggcaacaaatgatagggcatacc
tccagctggctacttatgtctaaaatgatcactaactctgtgattaactttgctagtttt
atggttcaaatttcaattattggggttgtggtattaggtgtttacagagtctcagataat
ctgatttctatgggggggataatcgcagctgtcatgttaactggtcgtgcaatttcacct
gtggctaaacttgcaggtttaatgacacgctctagtcaaacaatgagtgccttaagacaa
cttgataatttaatggagcaagagggggagtttgaaaacaaagctcacttggcaagcagg
ccaaagctagtaggtaatatttgtgctgaaagtgtcagttttacctacccggataccaaa
aatccagctttgcaaactatgtcaattgatataaaacaaggtgaaaaaatcgccatcgtg
gggcgaaacggctcgggcaaaaccactttagcaaaactattattaggtctgtatcagcct
actgctggcaacatccaatttgatgggttaaatcataatcagatacatcccagcgattta
cgacgaaatattggctacttacctcaggatatcactttatttcatggcaccattcgcgac
aatattttgtttggtacaaggcaagtaactgaatatcagcttatccgtgcggttcaactg
tcgggggtgaatgcttttactgatcataacactcagggacttgatcaacaggttggtgaa
aatggcagtactttatcacgtggacagcgccaatcgattgcactagctcgggctatttta
aatacaccacaaatattgttattagatgaaccaacagccagcttagatgctcgcgctgaa
cagcaatttatcaaatttattagcgctacagcaagggatcgcaccttattgttaattacc
cacaaaatggatttattatctttagtggatagaataatcgttctcgagaaaggtaaatta
gtcatggacggtcctaaagatgtcgtgttggagaaactcaaaggtggtaagggcaatccg
gtggtaaatctatga
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