Paraglaciecola psychrophila: C427_5358
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Entry
C427_5358 CDS
T02535
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
gps
Paraglaciecola psychrophila
Pathway
gps00071
Fatty acid degradation
gps00280
Valine, leucine and isoleucine degradation
gps00310
Lysine degradation
gps00362
Benzoate degradation
gps00380
Tryptophan metabolism
gps00410
beta-Alanine metabolism
gps00640
Propanoate metabolism
gps00650
Butanoate metabolism
gps00907
Pinene, camphor and geraniol degradation
gps00930
Caprolactam degradation
gps01100
Metabolic pathways
gps01110
Biosynthesis of secondary metabolites
gps01120
Microbial metabolism in diverse environments
gps01200
Carbon metabolism
gps01212
Fatty acid metabolism
Module
gps_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
C427_5358 (fadB)
00650 Butanoate metabolism
C427_5358 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
C427_5358 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C427_5358 (fadB)
00310 Lysine degradation
C427_5358 (fadB)
00380 Tryptophan metabolism
C427_5358 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
C427_5358 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
C427_5358 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C427_5358 (fadB)
00930 Caprolactam degradation
C427_5358 (fadB)
Enzymes [BR:
gps01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
C427_5358 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
C427_5358 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
C427_5358 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
C427_5358 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
NAD_binding_2
DUF4078
Motif
Other DBs
NCBI-ProteinID:
AGH47455
UniProt:
M4RUV1
LinkDB
All DBs
Position
5154995..5156173
Genome browser
AA seq
392 aa
AA seq
DB search
MGGGIAYQSAVKGTPVIMKDINQAALDLGLKEAATILGKGMQRGKVDVATMASTLNSIVP
TLEYSAIKDVDLVIEAVVENPKVKSIVLAETEQHVSDDTIICSNTSTISINHLAKSLKKP
ERFCGMHFFNPVHKMPLVEIIRGEKTSEDTISAVVAATLKMGKTPIVVNDCPGFLVNRVL
FPYFAGFSRLIMDGADFVAVDKVMEKIFGWPMGPAYLLDVVGMDTSDHASSVMSDGIPER
MQKIANDPVTLLYKADRLGQKNGKGFYNFSLDKRGRPAKVAAPEAYELFAPHCAAKRDFD
KDEIIARVMIPMANEAIRCLEEGIVASAAEADMALLYGLGFPPFKGGIFRFIETMGLANF
VALADKYADLGPVYQISDGVREMAASNKSYFA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcggaatagcctaccagtctgcggtgaaaggcacacctgttataatgaaagac
attaaccaagctgcattggacttgggtttaaaagaagccgcgactattttaggtaaaggc
atgcagcgcggtaaagtcgatgtagccacaatggcttcaactctcaatagcattgtgcct
acattagaatactcagccattaaagacgtcgacttagtgattgaagcggtagtcgaaaac
cctaaagtaaaaagcatagtattagctgaaactgagcagcatgtatctgacgatacgatt
atttgttctaacacctcgactatttctatcaaccatttagccaaaagcttgaaaaagcca
gaacgcttctgtggtatgcacttctttaaccccgtgcacaaaatgccattagttgaaatc
attcgcggtgaaaaaacctctgaagacacaatttctgcagtagttgcagccactttaaaa
atgggtaaaaccccgattgtggtcaacgattgcccaggctttttagttaaccgtgtattg
tttccttacttcgcaggtttcagcagattgattatggacggtgccgactttgttgccgtt
gataaggtcatggaaaaaatatttggttggccaatgggtcctgcttacctgcttgatgtg
gtaggcatggacacgtctgatcacgcatctagcgtaatgtctgatggtatccctgagcgg
atgcagaaaattgctaacgaccctgttaccttattgtataaagcagatcgtttaggtcag
aaaaatggtaaaggtttctataacttcagcctagacaagcgtggccgcccagctaaagtg
gcggcaccagaagcttacgaattgttcgccccacattgcgctgctaagcgcgacttcgac
aaagacgaaatcattgcaagagtgatgatcccaatggccaatgaagccattcgttgtcta
gaagaaggcatcgttgccagtgcagctgaagccgatatggcattactttatggtttaggc
tttcctccctttaaaggtgggatattccgctttattgaaacgatgggcttagccaacttt
gtagcattagccgataaatacgctgatttaggtccggtttatcagatttctgatggtgtg
cgcgaaatggccgcatcaaacaaatcatattttgcgtag
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