Paraglaciecola psychrophila: C427_5513
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Entry
C427_5513 CDS
T02535
Name
(GenBank) nifR3 family TIM-barrel protein
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
gps
Paraglaciecola psychrophila
Brite
KEGG Orthology (KO) [BR:
gps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gps03016
]
C427_5513
Transfer RNA biogenesis [BR:
gps03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
C427_5513
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
SOR_SNZ
MR_MLE_C
NMO
TMP-TENI
NanE
ThiG
Motif
Other DBs
NCBI-ProteinID:
AGH47610
UniProt:
K6Z4Q3
LinkDB
All DBs
Position
complement(5294108..5295073)
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AA seq
321 aa
AA seq
DB search
MAGVTDRPFRQLCKRLGAGLVVSEMLSSNPRVWDTEKSKQRMDHEGEEGVRSVQIAGSDP
ELMAQAAQFNVANGAQIVDINMGCPAKKVNKKLAGSALLQDPPLVEKIIQAVVKAVNVPV
TLKIRTGWNVENRNGLLIAQIAQDNGIQSLAVHGRTKACMYKGNAEYDTIKAIKQAVSIP
VVANGDITSAQKAKHVLEYTGADALMIGRGAQGHPWIFREILHYLQTGQVLAAPSIDEVS
SVLLEHVANVHQFYGGIKGCRIARKHVGWYLAEHDQQKLFRIKFNAIEDAGQQLDELTMY
FDKLAGEPVLSFVTELVSPAA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagtgacagacaggccatttagacaattatgtaaacgtcttggcgcaggtttg
gtggtgtcagagatgctctcgtccaaccctagggtttgggacacggaaaaatccaaacaa
cggatggaccatgagggtgaagagggtgtgcgctcagtgcaaattgcagggtcagatcct
gaattaatggcgcaagcggcacaatttaatgtggctaatggcgcgcaaattgttgatatc
aacatgggctgcccagctaaaaaagtgaataagaagttagcaggatccgcattgttgcaa
gacccaccattggttgagaaaatcattcaggcggtagtaaaagcagtcaatgtgcctgtt
accttaaaaatacgcacaggttggaatgttgaaaatcgcaatgggttattaatagctcaa
attgcacaggacaacggcattcaatcattggcggtgcatggtcgcaccaaggcctgtatg
tacaaaggcaacgcagaatacgacaccattaaagctattaaacaagcggtgtcgatacct
gttgttgctaacggtgatataacaagcgcgcaaaaagcgaagcacgttttggaatacacc
ggcgcagatgcgttgatgatcggtcgtggagctcagggtcacccttggatattccgcgag
atcctccactatctgcaaactggccaagtactggctgcacccagtattgacgaagtgagt
agcgtattgcttgaacacgtcgccaatgtccatcagttttacggtgggataaagggttgc
agaattgcccgcaagcatgtgggctggtatttggccgaacacgaccagcaaaagctgttc
cgtataaagttcaacgccattgaagatgcagggcagcaacttgatgagttaactatgtac
tttgataaattggcaggcgaaccagtactctcattcgtgactgagctagtttcacctgct
gcttaa
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