Gardnerella piotii: K9E43_00320
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Entry
K9E43_00320 CDS
T08320
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gpt
Gardnerella piotii
Pathway
gpt00061
Fatty acid biosynthesis
gpt00071
Fatty acid degradation
gpt01100
Metabolic pathways
gpt01212
Fatty acid metabolism
gpt02024
Quorum sensing
Module
gpt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gpt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K9E43_00320
00071 Fatty acid degradation
K9E43_00320
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K9E43_00320
09145 Cellular community - prokaryotes
02024 Quorum sensing
K9E43_00320
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gpt01004
]
K9E43_00320
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gpt04147
]
K9E43_00320
Enzymes [BR:
gpt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K9E43_00320
Lipid biosynthesis proteins [BR:
gpt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K9E43_00320
Exosome [BR:
gpt04147
]
Exosomal proteins
Exosomal proteins of breast milk
K9E43_00320
Exosomal proteins of breast cancer cells
K9E43_00320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
FAM25
Motif
Other DBs
NCBI-ProteinID:
UQA81051
LinkDB
All DBs
Position
complement(75185..77242)
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AA seq
685 aa
AA seq
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MLREFSVEDIHPTNDGDTIYSLLANRAMRDPQGVIAQWQDDNTRQWHDVSASQMLSKVRS
TARGLIALGVKQGDKIVIYSPTCYEWGVVDFACACIGAVSIPIYETDSALQAADIISEVK
PVIAFAGDDEHAQCLERVRQDNKRISLKTVFNFKANGIDAVIDFGKSISDDELNKAINQI
KADDLATIVYTSGSTGKPKGAMLTNRNFTHIVYAAYDVLNDMLYKPSRILLFLPLAHCFA
RYIQYVAVGANGVIGYVPNAKHLLADLRSFKPTYLLGVPRVFEKVYNAASQKAGAGIRGR
IFAKAVQHFAEWSKDEVEGKSHSIYAKLQHDFYMKTVGSSIRSALGPNLAWLACGGAPIN
AELAHFFNGLDGITFIQGYGMTETAAPCVVNFEHANQVGSVGKPGPGITIRIANDGEVLV
KGPNVFVGYYGKPELTAGVIDQDGWLHSGDLGEIDDEGFLTITGRKKDIIITAGGKNISP
APLETIIAKCPIVSHAVVVGDGKPFVSALIELEPDMVRSWLNNQGMDETIPMKDIAQNDA
IRSVVQQFIDQANSTVSRAESIRKFVILDEEFSQDAGTLTPSMKVVRPKVLKKYSDIIET
QLYAPKPNSRPLPATVKILDKTTETVKQAQETVKQAQEVVTPKVKQAIDQAATHLKRFGE
DLPVQSDSKESYSNNEDGVNQTVSE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgagaattttctgtagaagacattcacccaactaacgatggtgacacaatttat
tcattgcttgccaatagggcaatgcgagacccgcaaggcgtgattgcacaatggcaagat
gacaatactcgtcaatggcacgatgttagcgcatcacagatgctatccaaagttcgttct
actgcaagaggcttaatcgctcttggcgttaagcaaggagacaaaatcgttatttactct
ccaacttgttacgaatggggtgttgtggactttgcgtgcgcttgtattggtgctgtaagc
atacctatttacgaaactgactccgctcttcaagctgcagatattatttcggaagtaaag
cctgttatcgcttttgcaggagacgacgagcatgcgcaatgcttggaaagagttcgtcaa
gacaataagcgaatttcattaaaaacggtttttaactttaaggccaatggtattgatgct
gttattgattttggaaaatcaataagcgacgatgagctaaataaagctattaatcaaata
aaagcagatgatttagcaactattgtttacacttctggctctactggcaagccaaaggga
gcaatgcttactaatagaaactttacgcacattgtttacgcagcatacgacgttctaaac
gacatgttgtataagccaagtagaatacttctattccttcctcttgcacattgctttgca
aggtatattcaatatgttgcagttggagcgaacggcgttattggttatgttccaaacgct
aagcatttgttggcagatttgcgtagttttaagcctacgtatttgcttggcgttcctcga
gtgtttgaaaaagtttataacgcagcatctcaaaaagctggcgctggaatccgcggtaga
atctttgctaaggctgttcagcattttgctgagtggtctaaagacgaagtcgaaggaaaa
tcgcattctatttatgcaaaattacagcacgatttttatatgaagactgtcggttcttct
ataagatctgcacttggtcctaatttagcgtggctagcttgtggtggtgctccaataaat
gcagagcttgctcacttctttaatggattagatggaataacttttattcaaggttatgga
atgacggaaacagctgctccatgcgttgttaactttgagcatgctaatcaagttggttct
gttggaaagcctggtcctggaatcacaattcgcattgcaaatgatggagaagttcttgta
aaaggtcctaatgtttttgttggatattacggaaagccagagcttactgcaggagttatt
gaccaagatggatggcttcattctggcgatttaggcgagattgatgatgagggcttctta
acaattactggcagaaaaaaagacattattatcactgctggtggaaagaacataagtcct
gctcctcttgaaaccattattgcaaagtgtcctattgtttcgcatgcagtggttgttgga
gatggaaagccatttgtttctgctcttattgagcttgagccagatatggttcgttcttgg
cttaataatcaaggaatggatgagactattccaatgaaagatattgcgcaaaatgatgca
atccgatctgttgttcagcaatttattgatcaagctaatagcacagtttctagagcggag
tctattcgtaaatttgttattttagacgaagaattctctcaagatgctggtacgttaacg
ccaagcatgaaggttgtgcgtccaaaggttttgaagaaatatagcgatattattgaaacg
cagctgtatgctccaaaacctaatagtaggccacttcctgcaacggttaagattttagat
aaaacaaccgaaactgttaagcaggctcaagaaactgttaagcaagctcaagaggttgtt
actcctaaagttaagcaagctattgatcaagctgcaacgcatttgaagcgttttggagaa
gatttgcctgtgcaatccgattctaaggaatcttactcaaataatgaagatggagtaaac
caaaccgttagtgaataa
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