Gardnerella piotii: K9E43_00890
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Entry
K9E43_00890 CDS
T08320
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
gpt
Gardnerella piotii
Pathway
gpt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gpt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
K9E43_00890 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gpt03019
]
K9E43_00890 (orn)
03009 Ribosome biogenesis [BR:
gpt03009
]
K9E43_00890 (orn)
Messenger RNA biogenesis [BR:
gpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K9E43_00890 (orn)
Ribosome biogenesis [BR:
gpt03009
]
Eukaryotic type
Pre-60S particles
RNases
K9E43_00890 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UQA81149
LinkDB
All DBs
Position
complement(218041..218748)
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AA seq
235 aa
AA seq
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MAEAKEDLTFTPEESRLIWIDCEMTGLDIFHDELCEVSVVPTDFNLKVLDDGIDLVIKPS
DAAVAHMNDFVRNMHTSSGLVDEWNKNGLPLEEAQKQVVEYVKRFLPEHGKAHLAGNSVG
SDKKFLDRYMPDLMANLHYRVIDVSTLKEISRRLYPDVYRNKPAKHGGHRALADIIESID
ELRYYRDMMFVTAPGPSESQAKAGAQHVESTSLLRDYERRGEALEDVNSAEKRDY
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagctaaggaagatcttacgtttacgccggaagaatcgcgtttaatttggatt
gattgcgagatgacgggtctcgatattttccacgacgaattatgcgaagtgtctgtagtt
ccaactgactttaatttgaaagttctagacgatggcattgatttagtgattaagccaagc
gatgctgctgtggctcatatgaacgattttgtgcgcaatatgcacacatcttctggtctt
gttgacgagtggaataaaaacggtttgcctctagaagaagcacaaaagcaggttgttgag
tacgtaaagcgctttttgccagagcacgggaaagcacatcttgctggaaactccgtcggc
tcagataaaaagttcctcgaccgctacatgccagatttaatggcaaatttgcattaccgc
gtaatcgacgtaagcacgttgaaggagatttcgcgcagactttacccagatgtttaccgc
aataagccagcaaaacacggaggtcatcgtgcgctcgcggatattattgagtcgattgac
gagttgcgctactaccgcgatatgatgttcgttacagctccaggaccaagcgaatcccag
gcaaaagcgggagcacaacacgttgaaagcacgagtttgcttcgcgactacgagcgccga
ggcgaagctctagaagatgtaaattccgcagaaaagcgtgattattaa
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