Gardnerella piotii: K9E43_01630
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Entry
K9E43_01630 CDS
T08320
Name
(GenBank) SufS family cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
gpt
Gardnerella piotii
Pathway
gpt00450
Selenocompound metabolism
gpt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gpt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
K9E43_01630
Enzymes [BR:
gpt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
K9E43_01630
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
K9E43_01630
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GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UQA81513
LinkDB
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Position
complement(402469..403776)
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AA seq
435 aa
AA seq
DB search
MRDFEDLRLQFPILSRKVHSKPLIYLDSAATSQKPQVVINAESEFYKTINAGVHRGAHEL
AALSTVAFEQARAKVAKLVGACSKEGSEEIVVTPGATGALNLLATSIGNATINSRLNRPG
FAEDNLTLRQHFVINEGDNIVVSRADHHSVLLPFQELAIRSGAELRWIDVSEDGRVRADA
DYLSTVIDERTKIVAVTHISNVTGAITDVSPICQRAHQVGAIFVLDACQSVPHIPVDFHA
LDVDFAAFSAHKMYGPTGVGFLYGRRNLLNALPPANFGGSMVELAWLNKPAQYMQAPYRF
EAGTQPVAQMVAAGVAADWLCSLGMNRVAKHEQELAEELLKLQDVPGVRVLGPLDLSKRI
ATVSFEVEGVHPHDVGQFLDAQGIAIRVGHHCAQPIHRHFGVYASNRVSVGVYNTIEEAR
ELIEAVSQVRAYFGA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgattttgaagatttaaggctccaatttccgattttaagtcgcaaagtacattca
aaacccttgatttacttggattctgcagcaacttctcaaaagccgcaagttgtaattaat
gccgaaagcgagttttataaaacgattaatgctggtgtgcatagaggcgcgcacgagttg
gcagcgcttagcacagttgcgtttgaacaagcgcgcgcaaaggttgcaaaactcgttggt
gcttgtagcaaagaaggcagcgaagagattgttgttacgcccggcgctacaggagcgctg
aatcttcttgctacttccattggaaacgcaactattaactctaggttaaatcgccctggt
tttgcggaagataacttaactttgcgccagcattttgtgattaatgagggagataatatt
gttgtttctcgcgcagaccatcattccgttttattgccattccaagagcttgcgattcgc
tctggcgcggagcttcgctggatcgatgtaagtgaagatggccgagtgcgcgcggacgct
gattatttgagcactgttattgatgagcgcacgaaaatcgttgcagttacgcatattagc
aatgttacgggcgcaatcacggatgtttcgccgatttgccagcgcgcgcaccaggttggg
gcgatttttgttcttgacgcttgccagtccgttccgcatattccagttgattttcacgcg
ctagatgttgattttgcagcctttagtgctcataaaatgtacggacctacgggagttggg
ttcttgtatggtcgccgcaatcttttgaacgctcttccgccagccaattttgggggatct
atggtggagcttgcgtggcttaacaagccagcgcaatatatgcaagcgccttaccgtttt
gaggcgggaactcagccagttgcacaaatggttgctgcaggagttgcagcggattggctg
tgctcgttgggtatgaatcgagttgcaaagcatgagcaggaacttgctgaagaattgctt
aaattgcaagatgttccaggagttcgtgtgcttggcccgcttgatttaagcaagcgcatt
gcaacggtttcttttgaagttgaaggcgtgcatccgcatgacgttggccagtttttggat
gcgcaaggaattgcgattcgcgttgggcatcattgcgctcaaccgattcatcgccatttt
ggcgtgtacgcttcgaatcgcgtttctgttggagtttataacacaatcgaagaagctcgc
gaattaatcgaagctgtttcccaagttcgcgcatattttggcgcatag
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