Gardnerella piotii: K9E43_01775
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Entry
K9E43_01775 CDS
T08320
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gpt
Gardnerella piotii
Pathway
gpt03420
Nucleotide excision repair
gpt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K9E43_01775
03430 Mismatch repair
K9E43_01775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpt03400
]
K9E43_01775
Enzymes [BR:
gpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K9E43_01775
DNA repair and recombination proteins [BR:
gpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K9E43_01775
MMR (mismatch excision repair)
Other MMR factors
K9E43_01775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
UQA81298
LinkDB
All DBs
Position
complement(440224..441864)
Genome browser
AA seq
546 aa
AA seq
DB search
MISTQESLESKKRESNENHGKDYAQSLLEGLDDSQRKAAMALQGPVRITACAGAGKTRTI
TRRIAYACAKGEWDENRVLAVTFSVKAAKEMQNRLKKLGVNNATVATFHSAALQHLRRVW
NDVCEAPFPNIMDDPKSVTEQALSHYTDFADMTSAQIRDIVAEINWAKVSLIAPDDYARA
YSCVSRDLPAALDVNQFVEAYKAYELEKNTRNLIDFNDLLLLACHVLRAFPKACEKIRSK
IGWITVDEYQDVSPLQHELLKCWLGNNRNICVVGDPAQTIYSFAGASSYDLLEFPNEFAP
LCADINLNTDYRSTERIVGLANRVLSKSAFRCDYLRLVSKNKGGARVTKTVYNTDYDEAV
DVAQRIYNAVKAGKALSKDFAILTRTNAQQNIFCKTLGDLGIHFSVRKDAGLQIDVLENN
FEDSNASDLSDSEKYVESGDAKDIDFAKESESEREKVDLIKKSLLPVTISTIHASKGLEF
KHVFLIGCSEGLLPFGSINRTQDADEEERRLMYVAITRAEATLHISYAICKDYGNGMQRS
VSHFLE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatttctactcaagagtctttagaaagcaaaaagcgcgaatctaacgaaaatcatggt
aaagattatgctcaatctttgctagaaggtttagatgattctcaacgcaaagcagcaatg
gcgttacaagggccagtgcgcattactgcatgcgctggagcaggtaagactcgcactatt
acacgaagaatcgcgtacgcgtgtgcaaaaggagagtgggacgaaaatcgcgttttagct
gttactttttctgtaaaagctgctaaagaaatgcaaaatcgccttaaaaaattaggcgta
aataatgcaactgttgcaacttttcattccgcagctttacaacatttaagacgagtttgg
aatgacgtttgcgaagctccttttccaaatataatggatgatccaaaaagcgttactgag
caagcattaagtcattacacagattttgcagatatgacttctgcgcaaataagagatatt
gttgcggaaatcaactgggcaaaagttagtcttattgcgccagatgattacgcgcgcgca
tattcttgcgttagccgagatcttcctgcagctctagacgttaatcaatttgttgaagca
tataaagcttacgagttagaaaaaaacacaaggaatcttattgattttaacgatttgcta
cttcttgcatgccatgttttgcgcgcttttcctaaagcatgtgagaaaatacgtagtaaa
atcggctggattactgttgacgagtatcaggatgtttctcctcttcaacatgagcttctt
aaatgttggcttggcaataatagaaatatttgcgttgttggagatcctgcgcaaactatt
tattcttttgcaggagcgagcagctacgatttacttgaatttcctaacgagtttgcgccg
ctttgtgcagacattaatctaaatacggattacagatctacggaacgtattgtagggctt
gctaatcgggttctttctaagtctgcttttagatgtgattatttaagacttgtgtcaaaa
aataagggtggcgctcgcgttactaaaactgtttacaacacggattatgacgaagctgtt
gatgttgctcaacgaatttataatgctgttaaagcaggaaaagcgctctctaaagatttt
gctattctaactcgtactaatgctcaacagaatatattttgcaaaactttgggtgattta
ggaatacatttttctgttagaaaagatgctggtttgcagattgatgttttagaaaacaat
tttgaagattcaaacgctagcgatttgagtgattcagaaaaatacgtcgaaagtggcgat
gcaaaagacattgactttgcaaaagaaagcgaaagcgagcgcgaaaaagtagatttaatc
aaaaaatctttacttcctgtaacgatttctacgattcatgcatctaaaggcttggaattt
aagcacgtgtttttaatcggctgcagcgaaggcttactgccatttggaagcattaataga
actcaagatgcagacgaagaagagcgcagacttatgtatgttgcaataacgcgcgcagaa
gcaaccttgcacatatcttatgcaatttgcaaagactacggcaacggaatgcaaaggtct
gtaagccactttttagaataa
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