KEGG   Gardnerella piotii: K9E43_03415
Entry
K9E43_03415       CDS       T08320                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
gpt  Gardnerella piotii
Brite
KEGG Orthology (KO) [BR:gpt00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gpt02048]
    K9E43_03415
Enzymes [BR:gpt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     K9E43_03415
Prokaryotic defense system [BR:gpt02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   K9E43_03415
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD DUF87 AAA_22 Adcy_cons_dom
Other DBs
NCBI-ProteinID: UQA80523
LinkDB
Position
complement(909142..912483)
AA seq 1113 aa
MAKLKEYNGHYCESEYEYAFIGFLEAEGWYYIAGNHINRISKRDVLIADDFKKFIAKTNP
ELTEDEVTQIFDNVRLVGAESDFATLHKVYGWMVDGIQFTPQNGFAKMVPLIDFENPYNN
IFHVVNQLTVEYTNNGQKENRRPDVLLFVNGMPLCVIELKNPADAHATVYDAWEQINIRY
WRDIPHLLHYCPLACISDGVKTRLGTVRTPYEHFYAWRRVNDDDKVSTLPFAETETMIKG
VYSPARFLEIFRDYIYFQDSIYDSAEVEIVCRYPQFFAAKLLKQSIVNSIATGNGKGGTY
FGATGCGKTYTMAFLARQLALRCSNIPQVGSPTIILIVDREELQKQGAKLFTKSKEFLNL
GEVSVVKNRAQLRQELCARQSGGFYICTIQKFCDREDDKIGLINDRQNIICFSDEAHRTQ
LEHSKKIQFSKDADENMKAMVSKPYAKVLKEAFPHATFVGFTGTPIAETYQTFGQEIDRY
TMDQAVADGLTVSIKYHPRIAKVLLDKTKAKEIENYYKKCADDAATYDDIEASKRAMSSM
EVILGEPSRLERLATDIHDHYISSCDSDPDRIQKAMIVCSNRKIAYSLLLKFKDKYPEWF
EEKKTPDGVTATDEELKKLKPMPFMAMVSSVGSNDEAEMYNYLGGVKNDKRCEELDAAFK
QEKSNFHIVIVVDMWITGFDVPSLTYLYNDKPLKKHLLIQTISRVNRKYHGKEYGMVIDY
IGIRDNMREAMKVYGGDTSVAPTSDDVEQATSAFREELEILKALFTDYDLAPFLNTKCDP
VERYKLLSKAAEHVFTSAQVLQTEGNGKTNQVSFKTYFLKSVKRMRSAFDICQPSGNLGE
EESALAQCFMAIAGFVRKMSGTSDVDAETMNLVVSKMVEEALKYNKVESVLESGEEEDIF
SPEYFEKLSDVEMPATKLELLIKMLRKQIKEYGRVNQLAAKSFQEMIEKTIDEYHERRKH
LTAEEAGATQEAASEDIIKAATEQALVILRQMNENRESFRKIGLTFEEKAFYDILIALRD
QYKFEYGIDKEVNGVVVNDKCKTLAKKVKEIIDTESSFVDWLNNQNVRNQLKLKIKICLV
KNGYPPQYSPEVFTKVMEQVENFEEHSETTSES
NT seq 3342 nt   +upstreamnt  +downstreamnt
atggcaaagttaaaggagtataacggccactactgtgaatcagagtatgagtatgccttc
attggattcttggaagcggaaggatggtattatatcgcaggcaatcatatcaaccgcatt
agcaaaagagatgtgttgattgccgatgatttcaaaaagtttattgccaagacaaatcca
gaacttaccgaagatgaggttacacagattttcgacaatgtccgtcttgtcggtgcggaa
agtgattttgcaaccttacataaagtctatggttggatggttgatggtattcagtttacg
ccgcaaaatggttttgcaaagatggtacctctcatcgactttgaaaatccttataataat
atcttccatgttgtcaatcagcttactgtagaatatacaaacaatggacagaaggaaaat
cgcagacctgatgtgctgttgtttgttaacggtatgccattatgcgttatcgagcttaaa
aatccagctgatgcgcatgcaacagtttatgacgcttgggaacagattaatattcgttac
tggagggatattccccatttattgcattactgtcctcttgcctgtatttccgacggcgtg
aagacaaggcttggaacagttcgcactccttacgagcatttctatgcttggcgacgtgtg
aatgatgatgataaggtttctacgcttccatttgctgaaactgaaacaatgattaaaggt
gtatattcacctgccagatttttagagattttcagagattatatttatttccaagatagt
atttatgacagtgccgaagttgaaattgtatgtagatatccgcagttttttgctgcaaaa
ttattaaagcaaagcattgttaattctatcgctaccggaaatggtaaaggtggtacatat
tttggagcaactggctgtggtaaaacatatacaatggcttttcttgcccggcagcttgca
cttcgttgttctaatattcctcaagtaggctcgccgacaattattcttattgttgatcga
gaagaattacaaaagcagggcgcaaagctatttaccaaaagtaaagaattcttaaatctt
ggtgaagtatctgttgttaaaaacagagcacagttaagacaggaactctgtgcaagacaa
agcggtggtttctatatctgcacaattcagaaattctgtgaccgtgaagatgataaaatc
gggcttatcaatgaccgtcagaacattatatgtttttctgatgaagctcatagaactcag
cttgaacattctaaaaagattcagttcagtaaggatgctgatgaaaatatgaaagctatg
gtttcaaagccatacgcaaaagtgttaaaggaagcatttccgcatgctacgtttgtaggt
ttcacaggaactcctattgccgaaacatatcagacctttggtcaggaaattgatagatac
actatggatcaggcggtcgcagatggactaactgtttctattaagtatcatcctcgtatt
gccaaggtgttacttgataagaccaaagctaaagaaattgaaaattactataaaaaatgt
gccgatgacgctgcaacgtatgacgatattgaagccagtaaacgtgcaatgagttctatg
gaagttatacttggcgagccttctcgcttggaaaggcttgctacagatattcatgaccat
tatatttcatcttgtgatagtgacccagatagaattcagaaagcaatgattgtatgctct
aacagaaaaattgcatattcacttcttttgaaattcaaggataaatatccggaatggttt
gaagaaaagaaaactcctgacggagttactgcaacagatgaagaacttaaaaaattaaaa
cctatgccatttatggctatggtatcgagtgttggaagtaatgatgaagctgagatgtat
aactatcttggtggcgttaaaaatgataaacgttgcgaagaactggatgcagcctttaaa
caggaaaagtctaatttccatattgttatcgtagttgatatgtggattacgggatttgat
gttccgtcacttacatatttatataatgataagcctttgaagaagcacttgctgattcaa
actatcagtcgtgtaaacagaaaatatcacggcaaagaatatggtatggttattgactat
attggcattcgcgataatatgcgtgaggctatgaaggtttacggtggtgatacatcagtt
gctcccacatcggatgacgttgagcaggctacctctgcattcagggaagagcttgaaata
cttaaagcactgtttacagattatgacttagctccattccttaatacgaaatgtgaccct
gttgaaagatataaattactttccaaagccgctgagcatgtctttacatcagcacaggtc
ttgcagacagaaggaaacggaaaaactaatcaggtctcgtttaagacatatttcttaaag
tctgttaagagaatgagaagtgcttttgatatttgccaaccttctgggaatctgggcgaa
gaagaatctgcgcttgcacagtgctttatggctatagcaggtttcgttcgtaaaatgagc
ggaaccagcgatgttgatgctgaaactatgaatcttgtggtatcaaagatggttgaagag
gcattaaaatacaataaggtagaaagtgttcttgaaagtggcgaggaagaagatatcttc
tctcctgaatactttgaaaaattatcagatgtagaaatgcctgctacaaagttagaatta
cttatcaaaatgctccgtaagcaaataaaggaatatggcagggtcaaccaattagcagcg
aaatctttccaagaaatgattgaaaagactattgatgagtaccatgaaagacgtaagcac
cttactgctgaagaagccggggcgacacaggaagctgcctcagaagatattattaaggct
gcaactgaacaagctttagtaatacttcgtcagatgaacgaaaatcgtgagagtttccgt
aaaataggattaacctttgaagaaaaggcattctatgatattttgattgctcttcgtgac
caatataagtttgaatatggcattgacaaagaagttaacggtgttgtggtaaacgataaa
tgcaagacacttgctaaaaaagttaaggaaataatagataccgagtcttcatttgtagac
tggctcaacaatcagaatgtgcgtaatcagttaaaattgaagataaagatttgtttggtt
aagaacggctatccgccacagtatagtcctgaagtgttcacaaaggttatggagcaggta
gaaaattttgaggagcattctgaaacaacttcagaaagttag

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