Gardnerella piotii: K9E43_04390
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Entry
K9E43_04390 CDS
T08320
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gpt
Gardnerella piotii
Pathway
gpt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gpt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K9E43_04390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gpt03021
]
K9E43_04390
03400 DNA repair and recombination proteins [BR:
gpt03400
]
K9E43_04390
Enzymes [BR:
gpt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K9E43_04390
Transcription machinery [BR:
gpt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K9E43_04390
DNA repair and recombination proteins [BR:
gpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K9E43_04390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
UQA80696
LinkDB
All DBs
Position
1116312..1117307
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPTLTEESLNPQRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGAL
HEFTTLPGVEEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGKGEATAGDITPPAGVTIAN
PQMHIATLAEDGELEIEFTVERGRGYVPAQMNKQENSEIGRIPVDSIYSPVLKVSYKVEA
TRVEQRTDFDKLILDVETKPAITPRDAVASAGSTLVELFGLCRELNVDAEGVEVGPAPVM
AEADSQMATPIEDLNLTQRSYNCLKREGIHTVGELVVHTEQDLLDIRNFGMKSIDEVKEK
LQSMGLSLKPSPLGFDANNLEGGTFFSPEDE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgcttatcgcacagcgtccaacacttaccgaggaatcactgaatccccagcgttctcgc
tttactattgagccgttggaaccaggtttcggatacacgctcggcaattcgctgcgtcgt
accttgttgagctccattccaggtgcggccgttacttcggtacgcatctctggtgcttta
cacgagttcacgactctgccaggtgttgaagaggatgtcactgaaatcctgctgaacatc
aagggcatcgtacttacaagtgagtatgacgagccagtagtgatgtatctacgcaagagc
ggcaagggtgaggcaacagctggagatattactcctcctgctggcgtcactattgccaac
ccacagatgcatatcgctacacttgctgaagatggcgagctcgaaattgagttcactgtg
gagcgtggtcgtggctacgtgcctgctcaaatgaataagcaggaaaacagcgaaatcggt
cgcattccagtggattcgatctactcgccagttttgaaggtgagctataaggtcgaagct
acacgcgtggaacagcgcacggacttcgataagctcatcctggatgtggaaactaagcca
gctattacaccacgcgacgcggttgcgtccgcaggttcgactttggttgagctcttcggt
ctttgccgtgagcttaacgtcgatgctgaaggtgttgaagttggtccagctccagtcatg
gcggaagctgattcccaaatggccactccaattgaggatttgaacctaacgcagcgcagc
tacaactgcttgaagcgtgaaggaatccacacagttggtgagctggtagttcacactgag
caggatttgctcgatattcgtaatttcggcatgaaatccatcgatgaggttaaagaaaag
ttgcaatccatgggattgtctcttaagccttcaccgcttggctttgacgccaataatctc
gaaggtggcacattcttctcgccagaagacgagtaa
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