Gardnerella piotii: K9E43_04435
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Entry
K9E43_04435 CDS
T08320
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gpt
Gardnerella piotii
Brite
KEGG Orthology (KO) [BR:
gpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gpt03016
]
K9E43_04435 (truB)
Enzymes [BR:
gpt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K9E43_04435 (truB)
Transfer RNA biogenesis [BR:
gpt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K9E43_04435 (truB)
Prokaryotic type
K9E43_04435 (truB)
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
TruB_C
RBFA
DKCLD
Motif
Other DBs
NCBI-ProteinID:
UQA81551
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All DBs
Position
1126655..1127839
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AA seq
394 aa
AA seq
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MPSSGILLVDKPKGVTSHDVVSFARGLLHTKRVGHAGTLDPMATGLLILGFGNATRLLNY
LLGHNKTYEAVIRLGESTNTDDADGDVVSSADDENGIINFANIDEILKELRVVIAKNFTG
SIMQTPTSFSAIKVNGVRAYDLAREGKDVHLEPREVFIYDFSLLDAHFSVGVSGAKVIDV
CASVSCSSGTYIRALARDLGRVLGVGGHLVSLRRTRIGDFSIEDSRVLKLKSVIRTFTDK
NGVTHTRAKAVLDDSYYLQGLCESQAAGDSPSASPASSPLENTLNQRLLSMFESAKLTMQ
TVEVSENQAKDLRFGRKITISAISTKGATKNAIAYVKATKDEQNDVVAVLETAEKSQATA
SSSSTLFKSQEKIEKIEKNTNQIEAKPIVVFVQS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgccatcttctggcattttgctagtagataagccaaaaggcgttaccagtcacgatgtt
gtatcttttgcgcgcggcctgttgcacactaaacgagtgggtcatgctggcactttagac
ccaatggcaacgggcttgctgattcttggctttggtaacgccacgcgcttgcttaactat
ttgcttggtcacaataaaacgtacgaagctgtgattcgtcttggcgagtcaactaatacg
gacgacgcagatggtgatgttgtttcaagcgcggatgatgaaaatggcattataaacttt
gcaaatattgatgaaattcttaaagaattgcgcgttgtaatagcaaagaattttactggc
tcgattatgcaaacgccaacatctttttctgctataaaagtaaacggcgttcgcgcttac
gacttagcgcgtgaaggtaaagatgttcatttagagcctagagaagtttttatttacgat
ttttctttgctggatgcgcattttagtgtgggcgtaagcggcgcgaaagttattgatgtg
tgcgcaagcgtttcttgctctagtggcacgtatattcgcgctctagcacgcgatttgggg
cgtgttcttggagttggaggacacttagtgagccttagaagaacgcgaattggcgatttt
tctatagaagatagtcgcgtacttaagcttaaaagtgttattcgcacatttacagacaaa
aatggagtgactcacactcgcgcgaaggctgttttagacgattcatactatttgcaaggt
ttatgcgaatcgcaagctgctggcgattcgccatctgcttcgccagcttcatcgcctcta
gaaaacactcttaatcaacgcttgctaagcatgtttgaatctgcaaaattaacaatgcaa
acagtagaagtaagtgaaaatcaagctaaagacttgcgatttggcagaaaaatcacgatt
tctgctattagtacaaaaggcgctacaaaaaacgcgattgcatacgtaaaagccacaaaa
gatgagcaaaacgacgttgttgcagttctggaaaccgctgaaaaatcgcaagcaaccgca
agctcaagcagcacgctgtttaaatctcaagaaaaaatcgaaaaaatcgaaaaaaataca
aatcaaatagaagctaaaccaattgtagtatttgtacaaagctag
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