Gardnerella piotii: K9E43_04885
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Entry
K9E43_04885 CDS
T08320
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
gpt
Gardnerella piotii
Pathway
gpt02024
Quorum sensing
gpt03060
Protein export
gpt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
gpt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
K9E43_04885 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
K9E43_04885 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K9E43_04885 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gpt02044
]
K9E43_04885 (ffh)
Enzymes [BR:
gpt01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
K9E43_04885 (ffh)
Secretion system [BR:
gpt02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
K9E43_04885 (ffh)
Eukaryotic Sec-SRP protein
K9E43_04885 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_24
ArsA_ATPase
nSTAND3
cobW
AAA_31
AAA_22
AAA_33
ParBc
MeaB
APS_kinase
Zeta_toxin
AAA_18
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
UQA80782
LinkDB
All DBs
Position
complement(1237279..1238982)
Genome browser
AA seq
567 aa
AA seq
DB search
MAAFSSLTERLSGAFKHLRRKGKLSDSDIDGTIREIRRALLDADVALEVVRSFTAKIRER
ALGEEVSSALNPAQQVVRIVNDELTNVLGAGVERPLNFAKYPPTVIMLAGLQGAGKTTFA
GKLGYWLKDSGHTPLLVAADLQRPNAVTQLEVVAERAGVAIFAPERGVQSDGGSEVVSAG
LATGDPVKVARDSIDYARAKMYDTVIIDTAGRLGVDDALMKQAREIRDAVNPQEILFVID
AMIGQDAVRTAQAFNEGVDFTGVVLSKLDGDARGGAALSVASVTGKPILFASTGEGLKDF
EIFHPDRMASRILDMGDILTLIENAQKQFDEEESRKAAAKISEGTFGLDDFLDQLQQVKK
LGSMKKILGMMPGMAAHRQELEQFDDREIDRTEAIIRSMTPKERKDTKIIDGSRRARIAA
GAGVSVSAVNALLQRFEQAAKMMKRMSNGGGAGMPGMGGMPGFGGGAGKSKRKDKKSKKK
GGKSGNPMRREAEERALRDRLSGNSSASSANDGDDASESAFMKKKQDLPNNLPENLQNLM
SGEGDFAGGMPDLPPNLGGGLAGLFGR
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatttagttcgttaacagaaagactttctggcgcattcaagcacttgcgcaga
aaaggcaaactctccgattccgacattgacggcacaattcgcgaaatccgccgcgcgctt
ttagacgcagacgtggctttagaagttgtgcgatcttttaccgctaaaatccgcgagcgc
gcactaggcgaagaggtttctagcgcactgaatcctgcgcaacaggttgtgcgaattgta
aacgacgagcttacaaacgttttgggcgcaggcgttgagcgaccgctgaattttgcaaaa
taccccccaaccgtaatcatgcttgctggcttgcaaggcgctggtaaaacaacgtttgca
ggaaaattgggctactggcttaaggattcgggccatacgcctttgcttgttgcggcggat
ttgcagcgccctaacgccgttacgcagcttgaggttgttgccgagcgcgcaggagtggcg
atttttgcgccagagcgaggcgtgcaaagtgatggcggcagcgaagttgtttcggctggt
ttagcaactggagaccctgttaaggttgcgcgagattccattgactacgcgcgcgcaaaa
atgtacgacacggttattatcgataccgctggtcgccttggcgtggacgacgctcttatg
aagcaggcgcgcgaaattcgcgatgctgttaacccgcaagaaatcctgtttgttatagac
gccatgattggtcaggatgctgttcgcacggctcaagcgtttaatgagggcgttgacttt
acgggcgttgtgctttctaagttagatggcgatgcgcgaggcggcgctgcactatctgtt
gcaagcgttacaggcaagccgattttgttcgcttctactggcgaaggtttgaaggatttt
gagattttccacccagatagaatggcctccagaatcctagatatgggcgatattctaacg
cttattgagaatgcgcaaaagcagtttgacgaggaagagtctagaaaagcggccgccaaa
atatctgaaggaacttttggactagatgactttttggatcagcttcagcaggttaaaaag
cttggttctatgaagaagattcttggcatgatgcctggaatggcggcgcacaggcaagag
cttgagcagtttgacgaccgcgagatagaccgcacagaggcgattattcgctcgatgacg
cctaaggagcgcaaagacaccaagattattgatggttctaggcgcgcgcgaatcgcagct
ggcgcgggcgtttcagtttctgcagtgaatgcgcttttgcaacgctttgagcaagcagct
aagatgatgaagcgcatgagcaatggcggcggcgcaggaatgcctggaatgggcggaatg
cctgggtttggcggcggcgctggaaaatctaagcgtaaagacaaaaagagcaagaagaag
ggcggaaagtctggcaatcctatgcgccgcgaggccgaggagcgcgcgcttagagaccgc
ttgtctggaaattcttctgcaagtagtgcgaatgatggcgatgacgctagcgaatctgcc
tttatgaagaagaagcaggatttgcctaataatttgccagaaaatcttcaaaatcttatg
agtggcgaaggtgattttgctggcggaatgcctgatttgccgcctaatttgggtggcgga
ctcgcaggacttttcggcagataa
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