Gardnerella piotii: K9E43_05555
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Entry
K9E43_05555 CDS
T08320
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gpt
Gardnerella piotii
Brite
KEGG Orthology (KO) [BR:
gpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gpt03032
]
K9E43_05555
03400 DNA repair and recombination proteins [BR:
gpt03400
]
K9E43_05555
Enzymes [BR:
gpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K9E43_05555
DNA replication proteins [BR:
gpt03032
]
Prokaryotic type
DNA Topoisomerases
K9E43_05555
DNA repair and recombination proteins [BR:
gpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K9E43_05555
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
WDR55
LRIM1_dimer
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UQA80899
LinkDB
All DBs
Position
complement(1399253..1401937)
Genome browser
AA seq
894 aa
AA seq
DB search
MPSRSKSTKAAFDPRKVKENIVETPLNEEMSKSFLEYAYSVIYARALPDARDGMKPVQRR
IVYQMGNMNLTPDHAYMKSARVVGEVMGKLHPHGDSAIYEAMVRLAQPFSLRLPLVDGHG
NFGSLDDGPAASRYTEARLAPAALGMNADINEDTVDFAPNYDNKLKEPTVLPSAIPNLLV
NGASGIAVGMATNMATHNLGEVVAAAKYVMKHPNATLDDLMQIVPGPDWPGGGIIIGRSG
IREAYETGRGAFTTRSKTHIENVTARKKAIIVTELPFMVGPERVLERISQGIKARKLDGI
SGAIDLTDRHNGTRIVIEIKTGFDPNAVLAQLFKHTPLQESFTINNVALVDGRPHTMGLR
ELLDVWISHRRTVIRRRSEFRLNKAKERLHLVEGLLLAMLDIDEVIQVIRSSEDAETAKS
KLISVFDLDEIQAQYILDLRLRRLTKMSRIELEGEKNDLLQKIDELNEILSSANQLDKVV
IAEMDYAVKQWDTPRRTILLDEQEDGSFTPVCTKNTKVANNDLAMDAVIAANKITSTQAD
VAAAALAAKKSGSSDASAIALQLSDDPCAVALSTSGLIARTSVETFNRWQSHSSNVFDTP
CLSVFETTTRANYALITSAGRLVIAHVADLPHLNQGNEDVLESLSNGVNANELLTSTQST
DPIRGEKVVAAIALSDDSKTPTSSKTPLAIGTNNGVVKRWNFESPTTMDSWSIIDLKDND
SVIGAALAKDEDRIVFISSDSSLLTFDAKQVRAQGRSSAGMAGIRLNEGCAVSAFAVVAK
NDVEWNYEEGQNGLFSASGSVVFTLAGDSDALAGTENGAAKITPLEMYPTKGRGTGGVRS
QRFLKGQNTLLAAYVGNYPLYATTQRGANVELPKPDMRRDASGTELVSPIAHIG
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgccttcacgcagcaagtcaacaaaagcagccttcgaccctagaaaggttaaagagaat
attgttgaaacgccgcttaacgaagagatgagcaaatcttttctggaatacgcatattct
gtgatttacgcgcgagcattgccagacgcaagagatggaatgaagccagtacagcgcaga
atcgtgtaccaaatgggaaacatgaatcttacgccagatcacgcgtatatgaagtctgct
cgcgttgtaggcgaagttatgggaaagctgcatccgcacggagattccgcaatttacgaa
gcaatggtgcgtttagctcagccgttttctcttagactcccattggttgacggtcatgga
aactttggttccttagacgacggccctgcagcatccaggtacacagaagcgcgactagct
ccagcagcgcttggaatgaatgcagacataaacgaagacactgttgactttgcgccaaac
tacgacaataagctaaaagagccaacagttttgccttctgctataccaaacttgcttgta
aatggagcttctggaatcgcagttggaatggctacaaacatggctactcacaatcttgga
gaggttgttgctgcagcaaaatacgttatgaagcacccaaatgctactctagacgattta
atgcaaatagttccaggcccagactggccaggcggcggcataattattggccgcagcgga
atccgcgaagcgtacgaaactggaagaggcgcttttacaactagatcaaaaacgcatatt
gaaaacgttacagcacgcaaaaaggcgattattgttacagaattgccatttatggttggc
ccagagcgcgtgctcgaacgcatatctcaaggtataaaagcgcgcaaactagacggaata
tctggagcaatcgacttaacagataggcacaatggaacgcgaatcgtaatcgaaataaaa
acaggattcgacccaaacgctgttcttgcgcaactttttaagcacactccgctgcaagaa
agctttacaattaacaacgttgcactagtagacggcagaccgcacacaatggggcttcgc
gagcttctagacgtgtggatttcgcacagaagaaccgttattagaagacgcagcgaattt
aggctaaataaagccaaagaaagattgcaccttgtagaaggcttgcttcttgcaatgcta
gacattgacgaagtgattcaagtaattaggtcttccgaagatgcagaaaccgctaaatca
aagcttattagcgtatttgatttagacgagattcaagcgcaatacattcttgacttaagg
cttagaagacttacaaaaatgagtcgaatcgagctagaaggcgaaaaaaacgacttattg
caaaaaatagatgaacttaatgagattctaagctctgcaaatcagttagacaaagttgta
attgcagagatggattacgctgtaaaacagtgggatactcctcgcagaacgattctttta
gacgagcaagaagacggcagctttacgcctgtttgcactaaaaacactaaagttgcaaac
aatgatttagcaatggatgcagttattgcagcgaataagattacaagcactcaagcagac
gttgcagcagccgctctggccgccaaaaagtctgggagcagcgatgcttctgcaatagct
ttgcaattaagcgacgatccgtgcgctgtagctttgagcacgtctggacttatagcaaga
acaagcgttgaaacgtttaatagatggcaatcacattcttcaaatgtttttgacactcca
tgcttaagcgtgtttgaaacaacaactcgcgcaaactacgctttaataacatccgcaggg
cgattagtaatagcgcatgttgcagatttaccgcacttaaatcaagggaatgaagacgtt
ttagaatcgctttctaatggcgttaacgcaaacgaattgctaacttccactcaaagcaca
gacccgattagaggagaaaaagtcgtagctgctattgcattaagcgatgattctaaaact
cctacatcttctaaaactcctcttgcaatcggaacaaataatggcgttgtaaaacgatgg
aattttgaatcgccaacaacaatggattcctggagcattattgacttaaaagataatgat
tcagtaatcggagcagcacttgcaaaagacgaagacaggattgtgtttataagcagcgac
tcttccctacttacattcgacgcaaagcaagtgcgcgcacaaggacgaagctctgctgga
atggcaggaattaggcttaacgaaggatgcgctgtttctgcttttgctgtagttgctaaa
aatgacgttgaatggaactacgaagaagggcaaaacggactattttctgcttctggaagc
gtagttttcactcttgctggagacagcgacgcgcttgctggaacagaaaacggagctgca
aagattacaccgctagaaatgtaccctacaaagggtcgcggcacgggaggcgtgcgatcg
cagcgattccttaaggggcaaaacacgcttttggcagcatacgttggaaactatccgctt
tacgcgactacacaacgtggagcaaatgtggagctacctaagccagatatgcgaagggat
gcttcgggaaccgagctagtctcccctattgcgcatattgggtag
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