Gardnerella piotii: K9E43_05920
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Entry
K9E43_05920 CDS
T08320
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gpt
Gardnerella piotii
Pathway
gpt00061
Fatty acid biosynthesis
gpt00071
Fatty acid degradation
gpt01100
Metabolic pathways
gpt01212
Fatty acid metabolism
gpt02024
Quorum sensing
Module
gpt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gpt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K9E43_05920
00071 Fatty acid degradation
K9E43_05920
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K9E43_05920
09145 Cellular community - prokaryotes
02024 Quorum sensing
K9E43_05920
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gpt01004
]
K9E43_05920
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gpt04147
]
K9E43_05920
Enzymes [BR:
gpt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K9E43_05920
Lipid biosynthesis proteins [BR:
gpt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K9E43_05920
Exosome [BR:
gpt04147
]
Exosomal proteins
Exosomal proteins of breast milk
K9E43_05920
Exosomal proteins of breast cancer cells
K9E43_05920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
VpsT-like_REC
BPL_C
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UQA80964
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Position
1494522..1496345
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AA seq
607 aa
AA seq
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MQKYSRNLNEKIDYDANVFSLLENRVERNANGSLIEYLGENGKWESYSAKEFRDLVISVA
KGFIAHGVMPGDSISIIAHTSWQWTLLDMAIMSIGALTVPIYETSSVSQIENIVNDSNVS
MIFVEDEAIRDNVLIAKKSCKCLEEIFVLSSNAIDTFIEYGKTVTDAEFYEREKAVRGKD
LATIVYTSGSTGEPKGIELSHGNFVFIAKSGIVSMPDIALKSKNGNPRLLLFLPLAHVFA
RYMQFFCFTGNVTLGLSSNLKTILSDFKSFRPTFVLGVPRIFEKIYNAASQKAGRGLKGV
IFALSVKVAKQWSKAQQNGAMVSPLIAISHEFFKNTVYKSILQVFGGCVEYGVSGGAPLD
TSISHFFNGIGLPILEGYGMTETCAPSMVNPTKGYRIGTVGIPVKGVSVAIDDEGELCIK
SPAVCIGYHNHPEITEKQIVNGWLHTGDFGTLEPDGFVRITGRKKDLIITAGGKNVSPSI
LEASVMTCPIVSQCVVVGDRKPFISAIIALDLAEVNSWLISRGAGPVRSLDEARKNSIVR
SEIEQSVVKANSKVSRAQSIRKFEIVPDAFTQENGLVTPSLKAKRSVVLERYKDLIENKI
YAPRVKR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagtattctcgcaatcttaatgagaagattgattacgacgcaaatgttttttcg
cttcttgaaaatcgcgtagagcgcaatgcaaacggatccttaattgagtatcttggcgaa
aatggaaaatgggaatcctacagcgctaaagagtttagagatttagttatatctgttgca
aaagggtttatagcacacggtgttatgccaggggattcaatatctataattgctcatact
tcttggcagtggactttgctagatatggcaataatgtctattggagctttaactgttcca
atctacgaaacaagctctgtgagtcaaatagaaaacattgttaacgattccaatgtgagc
atgatttttgttgaagacgaagcaattagagataatgtattgattgcaaaaaagtcgtgt
aaatgtcttgaagaaatattcgtattgagttcaaacgcaatcgacacgtttattgaatac
ggaaaaaccgttacggatgcagaattttacgagagagaaaaagctgttagaggtaaagat
ttagcaacaattgtttatacttctggatctactggagagccaaaaggcattgagctttcg
cacggaaactttgtttttatagcaaagtctggaatagtttctatgccagatatagcgtta
aaaagtaagaatggtaatccacgacttttgctgttccttcctctagcacacgtttttgca
cgatatatgcaattcttttgctttactggaaacgttacgcttggattatctagcaatcta
aaaacaatacttagtgacttcaaaagctttaggccaacattcgtgcttggtgttcctaga
atatttgaaaaaatctacaatgcggcttctcaaaaagcaggaagaggattaaaaggcgtt
atatttgcgttaagcgtaaaagttgctaaacaatggtcaaaggcacagcaaaatggtgca
atggtttcgccattgattgcaataagtcacgaattctttaaaaacactgtatataagtcg
attttgcaagtttttggaggatgcgttgaatacggtgtttctggcggtgctcctttagac
acgtctatatctcacttctttaacggaattgggcttccaatcctggaaggctatggaatg
acagaaacatgcgcgccatcaatggtaaaccctacaaagggatacagaattggaacagta
ggtattccagttaaaggtgtgtctgttgcaatagatgatgaaggtgaactttgcattaaa
agccctgctgtttgcataggataccataatcatccagaaataacagaaaagcaaatagta
aatggttggctgcacacgggagattttggcacgctagaaccagatggatttgttaggatt
acaggccgtaaaaaagatttaataataactgctggcggtaaaaacgtttctccaagcatt
ctagaagcttctgttatgacttgcccaatcgtttctcaatgcgttgttgtaggagacaga
aagccgtttatatcggcaattattgcgcttgatttggcagaagtaaactcgtggcttata
tctagaggggcaggacctgtgcgctcgctggatgaagctcgaaaaaattcaattgtaaga
tccgaaattgagcaaagtgttgtaaaagcaaattctaaggtttctagagcacaatcgatt
agaaagtttgagattgttccagacgcgtttacgcaagaaaatggattggttactccaagc
cttaaagcaaaaagaagcgttgttttagagcgttataaagatcttattgaaaataagatt
tatgctccaagagtcaaaagataa
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