Gardnerella piotii: K9E43_06065
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Entry
K9E43_06065 CDS
T08320
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
gpt
Gardnerella piotii
Pathway
gpt00220
Arginine biosynthesis
gpt00240
Pyrimidine metabolism
gpt00250
Alanine, aspartate and glutamate metabolism
gpt01100
Metabolic pathways
gpt01110
Biosynthesis of secondary metabolites
gpt01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gpt00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
K9E43_06065 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
K9E43_06065 (carB)
00220 Arginine biosynthesis
K9E43_06065 (carB)
Enzymes [BR:
gpt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
K9E43_06065 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_4
GARS_A
ATPgrasp_Ter
ATP-grasp_2
CoA_binding_2
RimK
Arc_PepC
Motif
Other DBs
NCBI-ProteinID:
UQA80992
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Position
1532074..1535469
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AA seq
1131 aa
AA seq
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MPKRDDIKSVMVIGSGPIVIGQAAEFDYSGTQACRVLHEEGIRVILVNSNPATIMTDPEL
ADATYIEPIDTAILERIIAKEKPDALLPTLGGQTALNAAMDLGRAGILKKYNVELIGASL
EAIDRGEDRELFKKVVEKAGAESAKSFIAHSIEEVDKIVETLGYPVVVRPSFTMGGLGSG
IAHNQEELHRIAGAGIHYSPTDEVLIEEGIEGWKEFELELMRDSKDNVVVVCPIENVDPV
GVHTGDSITVAPCFTLTDREYQKMRDIGIAIIRGVGVDTGGCNIQFAINPKTGRIIVIEM
NPRVSRSSALASKATGFPIAKIATKLALGYTLDEIQNDITRSTPASFEPTIDYVVTKIPR
FAFEKFPGADTTLTTSMKSVGEAMALAGNFQESLGKAMRSIDKRHACFNWDGERPSKEEV
ARLLEEIHTPTEHRYLQIQRALWGGATPEQIFDATKIDPWFVEQLSLINKTALEVREAEN
LTPKVLKSAKLAGLSDVQIAHLRNLGDEGENMVRELRWAYGLHPVYKTVDTCAAEFDAVT
PYYYSCYAQESELKPRNREAVIILGSGPNRIGQGIEFDYTCVHAVQELGKDYDTIMVNCN
PETVSTDYDMSDRLYFEPLTFEDVLEIYQAEKKLGPVKGVIVQLGGQTPLSLAARLKAAG
VPILGTTPEAIDLAENRELFGEVLRQEGMNAPRYGTALSLEEAKDAAHAIGYPVLVRPSY
VLGGRGMEIVYDDAQLAKYVDRALQEARADTVVSGRLPSPLLIDKFLQDAIEIDVDALYD
GNELYIGGIMEHVEEAGVHSGDAACTLPPSTLSDDQIRRLREGTLSIARGCSVRGLINVQ
YAFMANTLYVIEANPRASRTVPFASKATGVALAKAAARIMSGETIEQQRKRGLLLPKGDG
GDIHPGQQVAIKASVLPFKRFRTPVGRTVDILLGPEMRSTGEVMGFDRDFPHAFAKSQLA
AYKGGLPTSGNVFVSVSDADKRQLPLLAVRLVELGFTIWATEGTASVLRRYGIDSVIVDK
LSSQGDTAKDVRNDVPSRERIGKNVVELIENGKIDMVLNTPNSRGSRTDGYAIRAAAVAA
DLPQFTTITEFAPVLMAIEAVKNNDYQVMSIQEHAKQLFAIEKAENEESRA
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgcgatgatattaagtctgtaatggtgattggttctggcccaatcgtaatt
ggtcaggctgcagaattcgactattcgggaacgcaagcttgccgagtgcttcacgaagaa
ggaatacgcgtaatccttgtaaactctaatcctgctacgattatgacggatccagagctt
gcagacgcaacatacattgagccaatagacacggcgattttggagcgcattattgctaaa
gagaagccagatgcgcttcttccaacgctaggcggccaaactgcgcttaatgctgcaatg
gacttgggtcgtgcaggaatcctaaaaaagtacaatgtggagcttattggcgcatctttg
gaagcaatcgaccgcggtgaagatcgtgagctttttaagaaagtcgtagaaaaagctgga
gcggaaagcgcaaaatcctttattgctcactcaattgaagaagtagacaagattgttgaa
acgcttggatacccagtagtggtacgcccaagctttacaatgggcggcttaggctctgga
attgctcacaatcaagaagaattgcaccgcattgcgggagctggcatccactattctcca
acagacgaagtgcttattgaagaaggcattgaaggctggaaggaatttgagctggagctt
atgcgagattctaaagacaacgttgttgttgtgtgcccaatcgaaaacgttgaccctgta
ggcgtgcatactggtgactcgattactgttgctccatgctttacgctaacagatcgcgag
tatcaaaagatgcgcgatattggcattgcgattattcgaggcgttggagttgatacaggt
ggatgcaatattcaattcgcaataaaccctaagactggccgcataatcgtaatcgaaatg
aatcctagagtttcgcgctcttcggcgctcgcatctaaagcaacaggattcccaatcgca
aaaatcgctacaaaacttgcgctcggctacactttggacgaaatccaaaacgatattacg
cgttcgactcctgcaagctttgagccaacgattgactatgttgtaactaagattccacgt
tttgctttcgaaaagttccctggagcagacactacgcttacaacttctatgaagtctgtt
ggcgaagcaatggctttggctggaaacttccaggagtctcttggaaaagcaatgcgctca
atcgataagcgccacgcatgctttaactgggacggcgagcgcccgagcaaagaagaagtt
gctagacttcttgaagaaatacacacgccaacagagcatcgctacttgcaaattcagcgc
gcgctttggggcggagcaactccagagcagatttttgacgcaacaaaaatcgacccatgg
tttgttgagcagctttcgttaatcaataaaacagctttagaggttcgtgaagcagaaaac
ttgacgcctaaagtgttaaagagcgctaagcttgcaggcctttcggatgttcaaattgcg
catttgcgtaatcttggagacgaaggcgaaaacatggttcgagagcttcgctgggcgtat
ggattgcatcctgtttacaaaacggttgacacttgcgctgccgaattcgacgctgtaacg
ccttactactattcttgctacgctcaagaaagcgagcttaagccgcgcaatcgcgaagcc
gtgatcattcttggctctggtccaaatagaatcggccaaggtattgagtttgactacact
tgcgttcatgctgtgcaagagctgggtaaggattacgacacaatcatggttaattgcaat
cctgaaacagtttctacagattacgatatgtcggatcgcctatactttgagccgcttact
tttgaagacgtgcttgagatttatcaagcagaaaagaagcttggtccagttaaaggcgtg
attgtgcaacttggcggccaaactccgctttcactcgcggctcgtcttaaagctgcaggc
gttccaattttgggtactacgcctgaggccattgatttggcggaaaatcgcgagcttttc
ggcgaggttcttcgccaagaaggcatgaatgctccgcgctacggcactgctttaagcctc
gaagaagctaaagatgctgctcacgcaatcggttatcctgttcttgtgcgaccaagctac
gtgcttggcggtcgtggcatggaaattgtgtacgacgatgctcagcttgcaaaatacgta
gatcgcgctttgcaagaagctagagcagatactgttgtttctggtcgcttgccttcgccg
cttttgattgataagttcttgcaagacgctattgagattgacgttgacgcgctttacgac
ggcaatgagctttatattggcggaattatggagcatgttgaagaggctggagtgcactct
ggcgatgctgcttgcactcttcctccaagcacgctttccgacgatcaaattcgccgcctt
agggagggcacgctttcgattgctcgcggatgctcggttcgtggtcttattaacgttcaa
tacgcttttatggcaaacactttgtacgtaattgaggcaaatcctagagcgtctagaact
gttccgtttgcttctaaagctacgggtgttgctcttgctaaagctgctgctcgaattatg
tctggagaaacaatcgaacagcagcgaaagcgtggtcttcttcttccaaagggagatggc
ggagatattcacccaggccagcaggttgctattaaagcttccgtcttgccttttaagcgt
ttccgcacgcctgttggtcgcacggttgatattttgcttgggccagaaatgcgctctact
ggagaagttatgggctttgaccgcgacttcccacatgcttttgctaagagtcagcttgca
gcatacaagggcggtttgcctacaagtggcaacgtgtttgtgtctgtaagcgatgcagat
aaacgccaattgcctcttcttgcagtgcgcttagtagaacttggatttacgatttgggct
acagaaggtacggcatctgttcttagacgctatggcattgattccgttattgttgacaag
ctctcaagccaaggcgacacggcgaaggatgtgcgaaatgacgtgccttcgcgcgaaaga
atcggcaaaaacgtggttgagctgattgaaaatggtaagattgatatggtgttgaacacg
ccgaattcaagagggtcgcgtacagatggttatgctattcgtgcagctgctgttgcagca
gacctcccgcaattcactacaattacggagtttgcaccagttcttatggctatagaagcc
gttaagaacaacgattaccaagtgatgagcattcaggagcatgcaaagcaactgtttgca
atcgagaaggcagaaaacgaagaaagtcgggcttaa
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