Gibbsiella quercinecans: AWC35_00360
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Entry
AWC35_00360 CDS
T05060
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gqu
Gibbsiella quercinecans
Brite
KEGG Orthology (KO) [BR:
gqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gqu03016
]
AWC35_00360
Enzymes [BR:
gqu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AWC35_00360
Transfer RNA biogenesis [BR:
gqu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AWC35_00360
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ATA17923
UniProt:
A0A250AVB7
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All DBs
Position
complement(69314..70435)
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AA seq
373 aa
AA seq
DB search
MNYQLITTDAGLQQVCEQARNHGQIALDTEFVRTRTYYPQLGLIQLYDGEQLSLIDPLPI
VEWQPFIDLLADSRVVKFLHAGSEDLEVFLNAFKTLPAPLVDTQILAAFSGRSLSCGFAS
LVAEYMGVELDKSESRTDWLARPLTEKQCVYAAADVFYLLPMAKRLVQETEEAGWTAAAA
NECLLLCQRRSEVLAPELAYREISNAWQLRPRQLACLQKLAAWRLNQARERDLAVNFVVR
EENLLQVARCMPSSLGELDSLGLSGPEIRYHGKTLLALVAEANALDDAALPAPVANLVDH
PGYKKVFKDIKAAIATVSEQSGLSSELLASRRQINQLLNWHWQLKCGDNQPELISGWRGE
LLAEALQNILKNY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgatcactacagacgccgggttgcagcaggtctgcgagcaggcaaga
aaccatggccagatcgcactggacaccgagtttgtcagaacgcgcacctactacccgcag
ttgggtttgatccaattatacgatggtgaacaactctcgctgattgatccgctgccgatc
gtagaatggcaacccttcatcgacctgttggcggacagccgcgtggtcaagttcctgcat
gctggtagcgaagatttggaagtgtttctcaatgcgttcaaaacgctgccggcgccgttg
gtggatacccagatcctggcggcgttctctggccgttcattatcctgcggttttgccagc
ctggtggcggaatacatgggggttgagctggataagagcgagtcgcggaccgattggctg
gcccgcccgttgaccgaaaagcagtgtgtttacgccgctgccgatgtgttttacctgttg
cctatggcgaagcgcctggtgcaggaaaccgaagaagcagggtggacggcggcggcggcc
aatgagtgcctgctgctgtgccaacgccgcagcgaggtgctggcgccggaattggcttac
cgtgaaatctccaacgcctggcaactgcgcccacggcagttggcctgcctgcaaaaactg
gcggcgtggcgcctgaaccaggcgcgcgagcgcgatctggcggtgaatttcgtcgtgcgc
gaggaaaacctgctgcaggtggcgcgttgtatgccatcttcgctcggggagttggattcg
ctggggctgagtggcccggagatccgctaccacggcaaaacgctgctggcgctggtggcc
gaagccaacgcgctggatgacgctgcgctgcctgcgccagtggcgaatctggtcgatcac
cctggctacaaaaaggtgtttaaggatattaaagcggcgattgccaccgtcagcgagcaa
agcggtttaagcagcgagctgctggcttcccgccgccagattaaccaattgctgaactgg
cattggcaattgaaatgcggtgataaccaaccagaattaatcagcggctggcgcggtgag
ttattggccgaagcgctgcagaatattttgaaaaattattaa
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