Gibbsiella quercinecans: AWC35_05130
Help
Entry
AWC35_05130 CDS
T05060
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
gqu
Gibbsiella quercinecans
Pathway
gqu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWC35_05130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gqu03400
]
AWC35_05130
DNA repair and recombination proteins [BR:
gqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWC35_05130
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AWC35_05130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
ABC_tran_CTD
SBDS_domain_II
PRDA1_C
DUF87
Motif
Other DBs
NCBI-ProteinID:
ATA18777
UniProt:
A0A250AXY2
LinkDB
All DBs
Position
complement(1148864..1150876)
Genome browser
AA seq
670 aa
AA seq
DB search
MSKLFKLHSEFKPAGDQPEAIRKLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTNGMIIDQRSILRRLAELQ
YTRNDQAFQRATFRVRGEVIDIFPAESDELALRVELFDEEVERLSLFDPLTGQIQQVVPR
FTIYPKSHYVTPRERILQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYKGDRSRKET
LVEYGFRLPSALDNRPMRFEEFEALAPQTIYVSATPGKYELEKSGGEIIEQVVRPTGLLD
PEIEVRPVTTQVDDLLSEIRKRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDKITDSMARAIGETERRRAKQQAYNAERGITPKGLNKKIGDILQIG
QSVNGKNLAKGKGKVASQPQNQLLSPKALEKKIRELEAQMYTHAQNLEFEQAAALRDEIQ
QLREQFIAIS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaactgttcaaactgcattctgagttcaaaccggccggcgatcagccggaggcc
atccgcaaactggaagaagggctggaagacggcctggcgcatcagacgttgctgggggta
accggttcgggtaaaaccttcacgatcgctaatgtgattgccgatctgaatcggccaacc
atggtgctggcgccgaataaaacgctggcggcgcagctgtatggcgagatgaaagagttc
ttcccggagaacgcggtggagtattttgtctcttactacgattactaccagccggaagcc
tatgtgccgagctccgatacctttatcgaaaaagacgcctcggtgaacgaacacatcgag
cagatgcgtctgtcggccaccaaggcgctgctggagcggcgcgatgtggtggtggtggcc
tcggtgtccgccatctacggtttgggcgatccggatctgtacctgaagatgatgctgcac
ctgaccaacgggatgattatcgatcagcgttcaatcctgcgccggctggcggagctgcag
tatacccgcaacgatcaggcctttcagcgcgccaccttccgcgtgcgcggcgaagtaatt
gatatcttcccggcggaatccgatgagctggcgctgcgcgtggaactgttcgacgaggaa
gtggagcggctgtcgctgtttgatccgctcaccggccagatccagcaggtggtgccacgg
tttaccatttatcccaaatcgcactacgtcacgccgcgtgaacgtattttgcaggccatg
gaagagatcaagctggagctggccgagcggcgcaaagtgctgctggccaataacaagctg
ctggaagaacagcgcctgacgcagcgcacccagtttgatctggagatgatgaacgaactg
ggctattgctccggcattgaaaactactcgcgttacctttccgggcgcgggccgggcgag
ccgccgcccacgctgttcgattacctgccggcggatggcttgctggtggtggacgaatct
cacgtgacgatcccgcagatcggcggtatgtacaagggcgaccgttcacgcaaggaaacg
ctggtggaatatggcttccgcctgccttccgcgttggacaaccgcccgatgcgttttgaa
gagtttgaagcgctggcgccgcagacgatctatgtttccgccacgccgggcaaatatgag
ctggagaaatccggtggtgaaattatcgagcaggtggtcaggccgaccggcctgctggat
ccggaaatcgaagtgcggccggtcaccacgcaggtggacgatctgctgtctgaaatccgc
aagcgggcggcgatcaacgaacgtgtgttggtgaccacgctgaccaaacggatggcggaa
gatctgacggaatatctggaagaacacggtgagcgcgtgcgctacctgcactcggatatc
gataccgtggagcgcgttgagatcatccgcgatctgcgcctgggggaattcgatgtgttg
gtgggcattaacctgttgcgtgaggggttggatatgccggaggtttcgctggtggcgatt
ctggacgccgataaagaaggcttcctgcgttccgaacgctcactgatccagaccatcggc
cgtgcggcgcgtaacctgaacggcaaggcgatcctttacggcgataaaattactgattcc
atggccagggcgatcggtgaaaccgagcgccgccgcgccaaacagcaggcatacaacgcc
gagcgaggcatcacgccgaaaggcctgaataaaaagatcggcgatattctgcaaattggc
cagtcggtcaacggtaaaaacctggcgaagggcaaaggcaaagtggcaagccagccgcag
aatcagctgctgtcgccaaaagcgctcgagaagaaaatccgcgaactggaagcgcaaatg
tatacccatgcacagaacctggagtttgagcaggcagcggcactgcgcgatgaaatccag
cagttgcgcgagcagtttatcgccatttcctga
DBGET
integrated database retrieval system
