Gibbsiella quercinecans: AWC35_08265
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Entry
AWC35_08265 CDS
T05060
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gqu
Gibbsiella quercinecans
Brite
KEGG Orthology (KO) [BR:
gqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gqu03016
]
AWC35_08265 (truD)
Enzymes [BR:
gqu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AWC35_08265 (truD)
Transfer RNA biogenesis [BR:
gqu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AWC35_08265 (truD)
Prokaryotic type
AWC35_08265 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ATA19331
UniProt:
A0A250AZQ2
LinkDB
All DBs
Position
complement(1813446..1814492)
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AA seq
348 aa
AA seq
DB search
MDMANLSWLHGKPRGSGVLKANPEDFVVVEDLGFEPDGEGEHLLVNIRKNGCNTQFVAEN
LARFAGIHARCVSYAGLKDRNAVTEQWFCLHLPGKTDPDLGQFALAGCEVLRAARHRRKL
RIGTLKGNAFTLILRQISDRQEVEQRLAAIAAQGVPNYFGSQRFGHGGNNLVMAKRWAND
EIRVRERNKRSFYLSASRSALFNHVASARLADGLQATVLAGDALQLTGRGSWFVAQTDEL
PSLQQRVDAGELRVTAPLPGDGEPGTADAALQFEQQCLAEQPELLTLLKRERVEPARRAL
LLQPQNMRWNWWDDVTVELRFWLPAGSFATSVVREIMLQDNGDADITE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggacatggcgaatctgagctggctgcacggtaaaccgcgcggcagcggtgtgttgaaa
gccaacccggaagatttcgtggtggtggaagacctgggctttgagccggatggcgaaggc
gagcacctgctggtcaacatccgcaaaaatggctgcaatacgcaatttgtggctgagaat
ctggcgcgcttcgccggtattcatgcccgctgcgtcagctatgccggcctgaaggatcgc
aatgccgtcaccgaacagtggttctgcctgcatctgccgggcaaaaccgatcccgatctc
ggccagtttgctttggcgggctgtgaagtgctacgcgcggcgcgccaccggcgcaagctg
cgcataggcaccctgaaaggcaacgcgtttaccctgatactgcgccaaatcagcgatcgc
caggaggttgaacaacggctggcggcaatcgccgcccagggcgtgccgaattattttggt
agccagcgcttcgggcatggcggcaataatctggtgatggcgaagcgctgggccaatgac
gaaattcgcgtcagagagcgcaacaagcgcagcttttacctctccgccagccgcagcgcg
ctgtttaatcacgtggcgagcgcacgtctggccgatggcctgcaggcaaccgtgctggca
ggcgatgccctgcagttgaccggccgcggcagttggtttgtggcgcagacggatgagctg
cccagcctgcaacagcgggttgacgccggtgagttgcgggtgactgcgccgctgcctggc
gatggcgaacccggcacggccgatgccgcgctgcagtttgagcagcagtgcttggcggaa
cagccagaattgcttacgcttttaaagcgtgaacgggttgagccggcgcgccgggcgctg
ctgttacagccgcaaaatatgcggtggaactggtgggacgacgtcaccgttgagctacgc
ttctggttgcctgcggggagttttgccaccagcgtggttcgcgaaattatgctgcaggat
aacggcgatgcggatattactgagtaa
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