Gibbsiella quercinecans: AWC35_09140
Help
Entry
AWC35_09140 CDS
T05060
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gqu
Gibbsiella quercinecans
Pathway
gqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWC35_09140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gqu03019
]
AWC35_09140
03009 Ribosome biogenesis [BR:
gqu03009
]
AWC35_09140
Enzymes [BR:
gqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWC35_09140
Messenger RNA biogenesis [BR:
gqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWC35_09140
Ribosome biogenesis [BR:
gqu03009
]
Prokaryotic type
rRNA helicases
AWC35_09140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
DeaD_C
ResIII
CMS1
UTP25_NTPase-like
Cas3-like_C_2
DRTGG
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATA19492
UniProt:
A0A250B0J6
LinkDB
All DBs
Position
complement(2009033..2010916)
Genome browser
AA seq
627 aa
AA seq
DB search
MTTEFETSFVDLGLSAPIISALTDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAA
FSLPLLHNLDAALKAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQL
RALRQGPQIVVGTPGRLLDHLKRGTLNLSSLKGLVLDEADEMLRMGFIEDVETIMAEIPA
DHQTALFSATMPEAIRRITRRFMNEPQEVRIQSSITTRPDISQSYWTVQGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
IERTMKLTIPEVELPNAELLGQRRLAKFAAKVQQQLESSDLDQYRALLAKLQPEEELDME
TLAAALLKMAQGERPLILPPDPVFKPRQRRELNERDDRRRDSSERPRRERRDVGEMQLYR
IEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGEILNHFTRTRI
LNKPMNMQLLGDAQPHERRDRGNGGERRGGRPFNGERREGAPRRSFGERREGGNAERRGG
NFNRDGKPAARRDDAAPAAPRRRFGDA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgactactgagtttgaaacctcttttgttgacctggggctgtcagctccgatcatttct
gccctgacagatttgggctacgaaaaaccatcaccgatccaggctgagtgtattcctcac
ctgttgaatggccgcgatgtgctgggtatggcacagaccggtagcggtaaaaccgcagcg
ttttcgctgcccctgctgcacaacctggatgcagccctgaaagcaccacaaatcctggtg
ctggcgccgacccgcgaactggcggttcaggttgctgaagcaatgaccgatttctccaag
cacatgcatggcgttaacgttgtggccctgtacggcggccagcgttatgacgtgcagctg
cgcgccctgcgccagggcccacagattgtggtgggcacgccaggccgtctgctggatcac
ctcaaacgcggtacgctgaacctctccagcctgaaaggtctggtactggacgaagccgac
gaaatgctgcgcatgggctttattgaagacgttgaaaccatcatggccgagatccctgcg
gatcatcagactgcactgttctctgccaccatgccggaagcgatccgccgtatcacccgc
cgctttatgaacgagccgcaggaagtgcgtattcaatccagcatcactacgcgcccggat
atcagccagagctactggactgtgcagggcatgcgtaaaaacgaagcgctggtacgtttc
ctggaagcggaagactttgatgccgccatcatcttcgtacgcaccaaaaacgccacgctg
gaagtggccgaagcgctggagcgcagcggttacagcagcgctgcgttgaacggcgacatg
aaccaggcgctgcgcgagcaaaccctggagcgtctgaaagatggccgcctggatattctg
atcgccaccgacgtggctgcccgtgggctggacgttgaacgtatcagcctggtagtgaac
tacgatatcccgatggattctgaatcctacgttcaccgtatcggccgtaccggccgtgcc
ggtcgtgctggccgcgcgctgctgtttgtggaaaaccgcgaacgccgcctgctgcgcaac
attgaacgcaccatgaagctgaccatcccggaagtggaactgccgaatgcagaactgctg
ggccaacgccgtctggctaagtttgccgccaaagtgcagcaacagctggaaagcagcgat
ctggatcagtaccgtgcactgctggctaaactgcagccggaagaagagctggatatggaa
acgctggctgctgcgctgctgaaaatggcgcagggcgaacgcccactgatcctgccaccg
gatcccgtcttcaagccgcgtcaacgccgtgagctcaacgaacgtgatgaccgccgccgt
gatagcagcgaacgtccgcgccgtgaacgccgtgacgtgggtgaaatgcagctgtaccgc
attgaagttggccgtgatgacggtgtggaagttcgtcatatcgttggcgctatcgctaac
gaaggcgacatcagcagccgttatatcggcaacatcaagctgtttgcttcccactccact
atcgagctgccaaaaggcatgccgggcgagatcctgaatcacttcacccgcacgcgcatc
ctgaacaagccgatgaacatgcaactgttgggcgatgctcagccgcatgaacgccgcgat
cgtggcaacggtggtgaacgccgtggcggccgcccgttcaacggtgaacgccgtgaaggt
gctccacgccgttctttcggtgagcgtcgtgaaggtggtaacgctgaacgccgtggcggt
aacttcaaccgtgacggcaaaccagccgcacgccgtgatgatgccgcgccagccgcacca
cgtcgccgcttcggtgacgcataa
DBGET
integrated database retrieval system
