Gibbsiella quercinecans: AWC35_10225
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Entry
AWC35_10225 CDS
T05060
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
gqu
Gibbsiella quercinecans
Pathway
gqu00071
Fatty acid degradation
gqu00280
Valine, leucine and isoleucine degradation
gqu00310
Lysine degradation
gqu00362
Benzoate degradation
gqu00380
Tryptophan metabolism
gqu00410
beta-Alanine metabolism
gqu00640
Propanoate metabolism
gqu00650
Butanoate metabolism
gqu00907
Pinene, camphor and geraniol degradation
gqu00930
Caprolactam degradation
gqu01100
Metabolic pathways
gqu01110
Biosynthesis of secondary metabolites
gqu01120
Microbial metabolism in diverse environments
gqu01200
Carbon metabolism
gqu01212
Fatty acid metabolism
Module
gqu_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
gqu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AWC35_10225 (fadB)
00650 Butanoate metabolism
AWC35_10225 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AWC35_10225 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AWC35_10225 (fadB)
00310 Lysine degradation
AWC35_10225 (fadB)
00380 Tryptophan metabolism
AWC35_10225 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AWC35_10225 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AWC35_10225 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AWC35_10225 (fadB)
00930 Caprolactam degradation
AWC35_10225 (fadB)
Enzymes [BR:
gqu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AWC35_10225 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AWC35_10225 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AWC35_10225 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AWC35_10225 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ATA19675
UniProt:
A0A250B0R4
LinkDB
All DBs
Position
2252500..2254689
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGENLQLIQLDHGIVELVFDAPGPINKLDTRTVASLGTALDVLEKLPGLQGLLLRSN
KAAFIVGADINEFIPLFAAPAEKLQQWLAFANAIFNRLEDLPVPTLSAINGYALGGGCEC
VLATDFRIATPDARIGLPETRLGIIPGFGGTVRLPRLLGNDSALEIIAAGKDLGAQEALK
VGLIDAIVALEKLRHAALQMLQQAMDGRLDWRASRQPKLEPLKLTAIEAAMSFTTAKGMV
LQTAGRHYPAPMAAIKTIESAARLGRDAALKLETASFVPLARTNETRALVGIFLNEQFVK
SRAKKLAQRSTAPKQAAVLGAGIMGGGIAYQSARKGVPVIMKDISDKPLALGMTEAAKLL
NKQWERGRLDGMKMAQVLATIQPTLNYAGIERAQVIVEAVVENPQIKAAVLAEVEGLIGE
ETVLASNTSTIPINQLAKALKRPQNFCGMHFFNPVHRMPLVEIIRGEHTSDRTLASIVAY
AIQMGKTPIIVNDCPGFFVNRVLFPYFAGFNLLLRDGVDFRRIDQVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMAKDGRDAIDVLFDNQRFGQKNGLGFYRYGQDSNGKP
RKTPDEQTDTLLAAIRRPGQEIGDDEIIARMMIPMVNEVVHCLEENIIASPAEADMALVY
GLGFPPFRGGALRYLDTIGTANYVERAQRYAHLGPLYQVPAGLRAKAAENQSYYPQPTPQ
PDIATGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaaacttacaactgatccagcttgatcatggcattgtcgagctg
gtattcgatgccccaggcccaattaataaactggatacccgtaccgtcgccagcctgggc
actgcgcttgacgtgctggaaaaactgcccggccttcaggggctgctgctgcgctccaac
aaggcggcatttattgtcggcgccgatattaatgaattcattcctttattcgccgcgccg
gccgaaaagctgcaacagtggctggcgtttgccaatgccatttttaatcgcctggaagat
ctgcccgtccccacgctctccgccattaacggctatgcgctgggcggcgggtgcgaatgc
gtactggcgaccgatttccgtatcgccacgccggatgcccgcatcggcctgccggaaacc
cggctgggcatcatccctggctttggcggtacggtacgcctgccgcgcctgttgggcaat
gacagcgcgctggagatcatcgccgccggcaaggatcttggtgcccaggaggcgctgaaa
gtcggcctgatcgatgcgatcgtggcactggaaaagctgcggcacgccgcgctgcaaatg
ctgcagcaggcgatggatggccggctcgattggcgcgccagccgccaacccaaactggag
ccgttgaaactgacggcgattgaagccgcgatgagcttcaccaccgccaagggcatggtg
ttgcaaacggccggcagacactacccggcgccgatggccgcgataaaaaccattgaaagc
gccgcccggctggggcgggatgcggcactgaagctggaaaccgccagctttgtaccgctg
gcccgcaccaatgaaacgcgcgcgctggtcgggatcttcctcaacgaacagtttgttaaa
agccgggcgaaaaagctggcgcagagaagcactgcgcctaagcaggctgcggttcttggc
gcgggcatcatggggggcggcattgcctatcaatctgcacgcaagggcgtgccggtcatc
atgaaagacatcagcgataaaccgctggcgctgggcatgacggaagccgccaaactgctg
aataaacagtgggaacgcggccggctggacggcatgaaaatggcgcaggtgctcgccact
atccagcccacgctcaattacgccggcattgagcgggcgcaggtgatcgtcgaagccgtg
gttgaaaacccgcagattaaagccgcggtgttagccgaggtggaaggcctgatcggggaa
gaaaccgtgctggcatccaacacctcaaccatccccatcaaccagttagccaaagcgctg
aaacgcccgcagaacttctgcggcatgcactttttcaacccggtgcatcgcatgccgtta
gtggaaatcatccgcggcgagcataccagcgatcgcaccctggccagcatcgtggcctat
gccatccagatggggaaaaccccgattatcgttaacgattgccccggtttcttcgtcaac
cgggtgctgttcccctactttgccggcttcaacctgttattgcgcgacggcgtagatttc
cgccgcatcgaccaggtgatggaaaagcagtttggctggccgatgggccctgcctacctg
ctggacgtggtcggcattgataccgcccaccatgcccaggccgttatggccgccggcttc
ccgcagcggatggcgaaagacggccgcgatgcgattgacgtgctgtttgacaaccagcgc
ttcggccaaaaaaacgggctgggtttttaccgctacggccaagatagcaacggcaaaccg
cgcaaaacccctgatgaacagacagataccctgctggcagccatccgccggccggggcag
gagatcggcgatgacgaaattatcgcccggatgatgatcccaatggtcaacgaagtggtg
cactgcctggaggagaacatcatcgccagcccggcagaagccgacatggcgctggtatac
ggcctcggcttcccgccgttccgcggcggcgcgctgcgctatctggatacgatcggtacg
gcaaattacgtcgagcgggcgcaacgctatgcccatctgggccctttgtatcaggttccg
gccgggctgcgcgccaaagcggcggagaaccaaagctactacccgcagcccacaccccaa
cccgatatcgccacgggccaaccggcatga
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