Gibbsiella quercinecans: AWC35_10795
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Entry
AWC35_10795 CDS
T05060
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
gqu
Gibbsiella quercinecans
Pathway
gqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWC35_10795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gqu03019
]
AWC35_10795
Enzymes [BR:
gqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWC35_10795
Messenger RNA biogenesis [BR:
gqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWC35_10795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CCDC138_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATA19778
UniProt:
A0A250B0M7
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All DBs
Position
2375069..2376355
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AA seq
428 aa
AA seq
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MSKTHLTEQKFSDFALHPLVIEALENKGFHNCTPIQALALPLTLSGRDVAGQAQTGTGKT
LAFLASTFHYLLSHPAKQDRQINQPRALIMAPTRELAVQIHSDAEALSQSTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYIDLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPAVDQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
DFTKGNLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLQRPRNSNGPRRNTSQRRSSAP
RNNRKRSG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaacagaacagaagttttccgacttcgccctgcacccgttagtg
attgaagcccttgaaaataaagggtttcataactgcacgcctattcaggcgttagcattg
ccgctcacgctctccgggcgtgacgtagcaggccaggcgcaaaccggtaccggcaagacg
ttggcatttttggcgtctactttccattatctgctttcccacccggcgaaacaggatcgt
cagatcaatcagccgcgcgcattgatcatggcgccaacgcgtgagttggcggtgcagatc
cactccgatgcggaagccctgtcccagtccaccggcctgaaactgggcctggcctacggc
ggcgacggctacgacaaacagctcaaggtgctggaaagcggcgttgatatcctgatcggc
accactggccgcttaatcgattatgccaagcagaactacatcgatttgggcgccattcag
gtggtggtgctggatgaggccgatcggatgtacgatctgggctttatcaaagacatccgc
tggctgttccgccggatgccagcggtggatcaacgcctgaacatgctgttctccgccacg
ctgtcctaccgcgtgcgcgaactggcctttgaacaaatgaacaacgctgaatatgttgaa
gtggaaccggaacagaaaaccggccaccgcataaaagaagagctgttctacccttccaac
gaagaaaaaatgcgcctgctgcagacgctgatcgaagaagaatggccggaccgcgccatc
atcttcgccaacaccaagcaccgctgtgaagacatctggggccatctggccgccgacggc
caccgcgtaggcctgctgaccggcgacgtcgcgcaaaagaaacgcctgcgtatcctggaa
gacttcaccaagggtaacctggacatcctggtcgccaccgacgttgctgcgcgtgggctg
catattccggccgtgactcacgtattcaactacgatctgcccgacgactgcgaagactac
gtgcaccgcattggccgtaccggccgcgccggcgccagtgggcactccatcagcctggcc
tgtgaagaatacgcgctcaacctgccagcgatcgaaacctataccggccacagtattccg
gtgagcaaatacaacagcgacgcgctgctgaccgatctgccggcgccaaaacgcctgcag
cgcccgcgcaacagcaacggcccgcgccgcaatacgtcgcaacgccgcagcagtgcgcca
cgtaacaaccgtaaacgttcaggctga
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