KEGG   Gibbsiella quercinecans: AWC35_10795
Entry
AWC35_10795       CDS       T05060                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
gqu  Gibbsiella quercinecans
Pathway
gqu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gqu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AWC35_10795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gqu03019]
    AWC35_10795
Enzymes [BR:gqu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AWC35_10795
Messenger RNA biogenesis [BR:gqu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AWC35_10795
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C CCDC138_C AAA_22
Other DBs
NCBI-ProteinID: ATA19778
UniProt: A0A250B0M7
LinkDB
Position
2375069..2376355
AA seq 428 aa
MSKTHLTEQKFSDFALHPLVIEALENKGFHNCTPIQALALPLTLSGRDVAGQAQTGTGKT
LAFLASTFHYLLSHPAKQDRQINQPRALIMAPTRELAVQIHSDAEALSQSTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYIDLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPAVDQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
DFTKGNLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLQRPRNSNGPRRNTSQRRSSAP
RNNRKRSG
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgagcaaaacacacttaacagaacagaagttttccgacttcgccctgcacccgttagtg
attgaagcccttgaaaataaagggtttcataactgcacgcctattcaggcgttagcattg
ccgctcacgctctccgggcgtgacgtagcaggccaggcgcaaaccggtaccggcaagacg
ttggcatttttggcgtctactttccattatctgctttcccacccggcgaaacaggatcgt
cagatcaatcagccgcgcgcattgatcatggcgccaacgcgtgagttggcggtgcagatc
cactccgatgcggaagccctgtcccagtccaccggcctgaaactgggcctggcctacggc
ggcgacggctacgacaaacagctcaaggtgctggaaagcggcgttgatatcctgatcggc
accactggccgcttaatcgattatgccaagcagaactacatcgatttgggcgccattcag
gtggtggtgctggatgaggccgatcggatgtacgatctgggctttatcaaagacatccgc
tggctgttccgccggatgccagcggtggatcaacgcctgaacatgctgttctccgccacg
ctgtcctaccgcgtgcgcgaactggcctttgaacaaatgaacaacgctgaatatgttgaa
gtggaaccggaacagaaaaccggccaccgcataaaagaagagctgttctacccttccaac
gaagaaaaaatgcgcctgctgcagacgctgatcgaagaagaatggccggaccgcgccatc
atcttcgccaacaccaagcaccgctgtgaagacatctggggccatctggccgccgacggc
caccgcgtaggcctgctgaccggcgacgtcgcgcaaaagaaacgcctgcgtatcctggaa
gacttcaccaagggtaacctggacatcctggtcgccaccgacgttgctgcgcgtgggctg
catattccggccgtgactcacgtattcaactacgatctgcccgacgactgcgaagactac
gtgcaccgcattggccgtaccggccgcgccggcgccagtgggcactccatcagcctggcc
tgtgaagaatacgcgctcaacctgccagcgatcgaaacctataccggccacagtattccg
gtgagcaaatacaacagcgacgcgctgctgaccgatctgccggcgccaaaacgcctgcag
cgcccgcgcaacagcaacggcccgcgccgcaatacgtcgcaacgccgcagcagtgcgcca
cgtaacaaccgtaaacgttcaggctga

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