KEGG   Gibbsiella quercinecans: AWC35_14730
Entry
AWC35_14730       CDS       T05060                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
gqu  Gibbsiella quercinecans
Pathway
gqu02020  Two-component system
gqu02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:gqu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AWC35_14730
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AWC35_14730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gqu03021]
    AWC35_14730
Transcription machinery [BR:gqu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AWC35_14730
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: ATA20495
UniProt: A0A250B327
LinkDB
Position
complement(3246026..3247459)
AA seq 477 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHDEVDAKE
NNETEGLDTREALEQKDMPEELPLDATWDEIYTAGTPSGTGTDYSDDELPVYQGETTQTL
QDYLMWQVDLTPFSDTDAAIATSIVDAVDDTGYLTVPLEDILESMGDENVTMDEVEAVLK
RVQRFDPVGVAARDLRDCLLVQLSQYAKDTPHLAEARLIISDHLDLLANHDFRSLMRATR
LKEDTLKEAMVLIQSLDPRPGQSINTGESEYVIPDVLVRKAHGKWTVELNTDSVPRLKIN
QQYAALGNSARNEADGQFIRSNLQEAKWLIKSLESRNETLLKVTRCIVDQQEAFFEQGEE
FMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLIAAENPAKPLSDSKLATLLSDQGIMVARRTVAKYRESLSIPPSNQRKQLI
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactcaggctcagccaacagctagccatgaccccgcagctacag
caggccatccgtctgctgcagttgtccacgctcgaactccagcaggagatccaactggcg
ttagagagcaatccgctgcttgaacagaccgatctgcacgacgaagtcgacgccaaagaa
aacaacgaaaccgaagggctggatacccgcgaggcgctggagcaaaaggacatgccggaa
gagctgccgctggacgccacctgggatgaaatttacaccgccggcacgccttcaggcacc
ggcaccgactacagcgatgacgaactgccggtgtaccagggtgaaaccacccaaacgctg
caggattacctgatgtggcaggtcgatttaacgccgttttccgacaccgacgccgccatc
gccacctcgatcgtcgatgccgtcgatgacaccggctacctcaccgtccctctggaagac
attctggagagcatgggtgacgagaatgtgacaatggacgaggtggaagcggtgttaaaa
cgcgtgcagcgttttgatccggtcggcgttgccgcgcgcgatctgcgcgactgcctgctg
gttcagctttcacagtatgccaaagacacgccgcatctggccgaagcgcggctgattatc
agcgatcacctcgatctgctggcaaaccacgatttccgcagcctgatgcgggcaacgcgg
ttaaaagaagatacactgaaagaagccatggtgctgattcagtcgctcgatccgcgcccc
ggccagtcgatcaataccggcgagtcggaatatgtgatcccggacgtgctggtgcgcaag
gcgcacggcaaatggacggtggagctcaataccgacagcgtgccgcggctgaagatcaat
cagcagtacgccgcgctgggcaacagcgcgcgcaacgaagcggacggccagtttatccgc
agcaacctgcaggaagccaaatggctgattaaaagcctggaaagccgtaacgaaacgctg
ctcaaggtcacgcgctgcatcgtggatcaacaggaggcgtttttcgagcagggcgaagag
ttcatgaagccaatggtgctggccgatatcgcccaggccgtcgacatgcatgaatcgacc
atttcgcgtgtcaccacgcagaagttcctgcacagcccgcgcggcattttcgaattaaaa
tatttcttctccagccacgtgaataccgacagcggcggcgaagcctcctcgacggcgatt
cgtgccctggtgaagaaattaatcgcggcggaaaaccccgccaaaccactgagcgacagc
aagctggcaaccttgctttccgatcaggggatcatggttgcccgccgtaccgtcgccaag
taccgagagtcgttgtccatcccgccgtcaaaccagcgcaagcagttgatttga

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