Gibbsiella quercinecans: AWC35_14730
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Entry
AWC35_14730 CDS
T05060
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
gqu
Gibbsiella quercinecans
Pathway
gqu02020
Two-component system
gqu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gqu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AWC35_14730
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AWC35_14730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gqu03021
]
AWC35_14730
Transcription machinery [BR:
gqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AWC35_14730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
ATA20495
UniProt:
A0A250B327
LinkDB
All DBs
Position
complement(3246026..3247459)
Genome browser
AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHDEVDAKE
NNETEGLDTREALEQKDMPEELPLDATWDEIYTAGTPSGTGTDYSDDELPVYQGETTQTL
QDYLMWQVDLTPFSDTDAAIATSIVDAVDDTGYLTVPLEDILESMGDENVTMDEVEAVLK
RVQRFDPVGVAARDLRDCLLVQLSQYAKDTPHLAEARLIISDHLDLLANHDFRSLMRATR
LKEDTLKEAMVLIQSLDPRPGQSINTGESEYVIPDVLVRKAHGKWTVELNTDSVPRLKIN
QQYAALGNSARNEADGQFIRSNLQEAKWLIKSLESRNETLLKVTRCIVDQQEAFFEQGEE
FMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLIAAENPAKPLSDSKLATLLSDQGIMVARRTVAKYRESLSIPPSNQRKQLI
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggctcagccaacagctagccatgaccccgcagctacag
caggccatccgtctgctgcagttgtccacgctcgaactccagcaggagatccaactggcg
ttagagagcaatccgctgcttgaacagaccgatctgcacgacgaagtcgacgccaaagaa
aacaacgaaaccgaagggctggatacccgcgaggcgctggagcaaaaggacatgccggaa
gagctgccgctggacgccacctgggatgaaatttacaccgccggcacgccttcaggcacc
ggcaccgactacagcgatgacgaactgccggtgtaccagggtgaaaccacccaaacgctg
caggattacctgatgtggcaggtcgatttaacgccgttttccgacaccgacgccgccatc
gccacctcgatcgtcgatgccgtcgatgacaccggctacctcaccgtccctctggaagac
attctggagagcatgggtgacgagaatgtgacaatggacgaggtggaagcggtgttaaaa
cgcgtgcagcgttttgatccggtcggcgttgccgcgcgcgatctgcgcgactgcctgctg
gttcagctttcacagtatgccaaagacacgccgcatctggccgaagcgcggctgattatc
agcgatcacctcgatctgctggcaaaccacgatttccgcagcctgatgcgggcaacgcgg
ttaaaagaagatacactgaaagaagccatggtgctgattcagtcgctcgatccgcgcccc
ggccagtcgatcaataccggcgagtcggaatatgtgatcccggacgtgctggtgcgcaag
gcgcacggcaaatggacggtggagctcaataccgacagcgtgccgcggctgaagatcaat
cagcagtacgccgcgctgggcaacagcgcgcgcaacgaagcggacggccagtttatccgc
agcaacctgcaggaagccaaatggctgattaaaagcctggaaagccgtaacgaaacgctg
ctcaaggtcacgcgctgcatcgtggatcaacaggaggcgtttttcgagcagggcgaagag
ttcatgaagccaatggtgctggccgatatcgcccaggccgtcgacatgcatgaatcgacc
atttcgcgtgtcaccacgcagaagttcctgcacagcccgcgcggcattttcgaattaaaa
tatttcttctccagccacgtgaataccgacagcggcggcgaagcctcctcgacggcgatt
cgtgccctggtgaagaaattaatcgcggcggaaaaccccgccaaaccactgagcgacagc
aagctggcaaccttgctttccgatcaggggatcatggttgcccgccgtaccgtcgccaag
taccgagagtcgttgtccatcccgccgtcaaaccagcgcaagcagttgatttga
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integrated database retrieval system