KEGG   Gibbsiella quercinecans: AWC35_15205
Entry
AWC35_15205       CDS       T05060                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03086  RNA polymerase primary sigma factor
Organism
gqu  Gibbsiella quercinecans
Pathway
gqu02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:gqu00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AWC35_15205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gqu03021]
    AWC35_15205
Transcription machinery [BR:gqu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AWC35_15205
SSDB
Motif
Pfam: Sigma70_ner Sigma70_r1_1 Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sas-6-like_oligomerization HTH_SUN2 DNA_ligase_A_N TMPIT
Other DBs
NCBI-ProteinID: ATA20580
UniProt: A0A250B2W9
LinkDB
Position
complement(3356347..3358185)
AA seq 612 aa
MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLMLAENTTDTDEDAVEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAGESRLSDLITGFVDPNAEEDIAPTA
THIGSELATEDQDDDEEEEDDDDDADDDNSIDPELARQKFAELRDQYEATRLVIKKNGRS
HASSAEEILKLSEVFKQFRLVPKQFDFLVNSMRTMMDRVRTQERIIMKMCVEQCKMPKKN
FVNLFASNETSDAWFEAALAMAKPWSEKLKDVEEDVQRSLQKLRQIEEETGLTIEQVKDI
NRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEY
RRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPE
ELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATSESLR
SATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHP
SRSEVLRSFLDD
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggagcaaaacccgcagtcacagcttaagctacttgtcacccgtggtaaggagcaaggc
tatctgacctatgctgaggtcaatgaccatctgccggaagatatcgtcgactccgaccag
atcgaagacatcatccagatgatcaacgacatgggcatccaggtgatggaagaagcaccg
gacgccgatgatttgatgctggccgagaacaccaccgataccgatgaagatgcggtagaa
gcggccgcccaggtgctttccagcgttgaatccgagatcggccgtactaccgacccggtg
cgcatgtacatgcgtgaaatgggtaccgttgagctactgacgcgcgaaggcgaaatcgac
atcgctaaacgtatcgaagacggtatcaatcaggtgcagtgctccgtcgccgaatacccg
gaagccatcacctatctgctggagcagtatgatcgcgttgaagcaggtgaatcgcgcctg
tccgatctgatcaccggcttcgtcgatcctaacgcggaagaggacatcgcccccaccgcc
acccatatcggttcggaactggcgaccgaagatcaagatgacgacgaagaagaggaagac
gacgacgacgatgctgacgacgataacagcatcgatccggaactggcgcgccagaagttc
gccgaactgcgcgatcagtacgaagcgactcgcctggtcatcaagaaaaacggccgcagc
cacgccagctccgcagaagaaattctgaaactgtcggaagtgttcaaacagttccgcctg
gtgccaaaacagttcgacttcctggtcaacagcatgcgtaccatgatggatcgcgtgcgt
acccaggaacgcatcatcatgaagatgtgcgttgaacagtgcaaaatgccgaagaaaaac
ttcgtcaatctgttcgccagcaacgaaaccagcgacgcctggttcgaagcggcgctggcg
atggccaaaccgtggtctgaaaagctgaaagacgttgaagaagacgttcagcgcagcctg
cagaaactgcgccagatcgaagaagaaaccggcctgaccatcgagcaggtaaaagacatc
aaccgccgtatgtccattggcgaagcgaaagcgcgccgggcgaagaaagaaatggttgag
gctaacctgcgtctggttatttcgatcgccaagaaatacaccaaccgcggcctgcagttc
ctggatctgattcaggaaggcaacatcggcctgatgaaagcggtcgacaagttcgaatat
cgccgtggctacaagttctccacctatgcgacttggtggatccgccaggcgatcacccgc
tccatcgccgaccaggcgcgcaccatccgtattccggtgcatatgattgagaccatcaac
aagctcaaccgtatttcgcgccagatgctgcaggaaatgggccgcgaaccgacgccggaa
gagctggctgaacgtatgctgatgccggaagacaaaatccgcaaggtgctgaagatcgcc
aaagagccaatttcgatggaaacgccaattggtgatgacgaagattcacatctgggcgat
ttcatcgaggacaccaccctcgagttgccgctggattccgcaacctctgaaagcctgcgc
tcggcaacgcacgatgtgctggccggcctgaccgcgcgtgaagcgaaagtgctgcgcatg
cgtttcggtatcgatatgaacaccgaccatacgttggaagaagtcggtaaacagttcgac
gttacccgtgaacgtattcgccagatcgaagccaaagcgctgcgtaaactgcgccaccca
agccgttcggaagtgcttcgcagcttcctggatgactaa

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