Gibbsiella quercinecans: AWC35_20200
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Entry
AWC35_20200 CDS
T05060
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
gqu
Gibbsiella quercinecans
Brite
KEGG Orthology (KO) [BR:
gqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gqu03032
]
AWC35_20200 (ihfB)
03036 Chromosome and associated proteins [BR:
gqu03036
]
AWC35_20200 (ihfB)
03400 DNA repair and recombination proteins [BR:
gqu03400
]
AWC35_20200 (ihfB)
DNA replication proteins [BR:
gqu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AWC35_20200 (ihfB)
Chromosome and associated proteins [BR:
gqu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AWC35_20200 (ihfB)
DNA repair and recombination proteins [BR:
gqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AWC35_20200 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HAAS
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
ATA22553
UniProt:
A0A250B8J2
LinkDB
All DBs
Position
4532482..4532766
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AA seq
94 aa
AA seq
DB search
MTKSELIERLAGQQSHIPAKAVEDAVKEMLEHMAATLAEGERIEIRGFGSFSLHYRAPRV
GRNPKTGDKVELDGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaacttattgaaagactggctggccagcaatctcatattccggctaag
gccgttgaggatgccgtgaaggaaatgcttgagcacatggctgcaacgttagccgagggt
gaacgcatcgaaatccgcggattcggcagtttttctcttcactaccgtgctccgcgcgtt
gggcgtaacccgaaaaccggtgacaaggttgagttggacggtaaatacgtgcctcacttc
aaaccgggtaaagagttgcgtgaccgtgccaatatctatggttaa
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