Gibbsiella quercinecans: AWC35_20275
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Entry
AWC35_20275 CDS
T05060
Name
(GenBank) peptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
gqu
Gibbsiella quercinecans
Brite
KEGG Orthology (KO) [BR:
gqu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gqu01002
]
AWC35_20275
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gqu01011
]
AWC35_20275
Peptidases and inhibitors [BR:
gqu01002
]
Cysteine peptidases
Family C82
AWC35_20275
Peptidoglycan biosynthesis and degradation proteins [BR:
gqu01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AWC35_20275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ATA21491
UniProt:
A0A250B5V4
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All DBs
Position
4551204..4553039
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AA seq
611 aa
AA seq
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MLLENGGSIRRLALSCAMACSISASLPTRAAVPAFPVSSSGISAAQSRVELMAALPSGVT
PHNLSTLAALYAGHHMQPMWQDREAVRQFQQQLAELAISGVQPQFTQWVKQLTDPAISGM
ARDIVLSDAMLGYLQFVSSIAANGNDWLYSNIPYKLGLPPNTVINQWQLAVRDGKTLAYV
ESLAPQHPQYAKMHQALRAMLADSRPWPRLANGPSLRPGQMSNDIPALREILTRNGMLSA
AAVAPATEPAAVLISSNAGDDGGLSVDEEKAQEAPPAVVSPSAAPVKDIAPSVTADTAQQ
PAGPAAVSDNIYTGDLVEGIKRFQKWQGLSDDGVIGARTREWLNVSPNMRASLLALNIQR
LRILPNSVNTGIMVNIPNYSLTYYQNGNEVLSSRVIVGRPSRKTPMMSSVLNNVVMNPPW
NVPTTLVREDIVPKAMRDASYFQKHGYTLLSGWSSDATVIDPAMIDWNTVSARNFPYRIR
QAPGTNNSLGRFKFNMPSSDAIYLHDTPNHALFQKDIRALSSGCVRVNKASDLANMLLQD
AGWNDSRVSSTLKGGNTTYVNIRQHIPVKLYYLTAWVSDDGKPQFRTDIYNYDDTVRSGA
QILAQAEKLLQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttgaaaatggaggctctatacggcgtctcgcactgagttgtgctatggcatgc
agtattagtgcgtcgttacctacacgggcagccgtgccagcgtttccggtttcatcatcc
ggcatctctgccgcacaaagtcgtgttgaattgatggcggcgttgccgtctggcgtcacg
ccgcataacctctctacgctggcggcgctgtatgctggccatcatatgcagcccatgtgg
caggatcgcgaggcggtacggcagtttcaacagcagttggccgagctggcgatctccggc
gtgcagccgcagtttactcaatgggtcaagcaactgacggatccggcaatcagcggtatg
gcgcgtgatattgtgctgtcggacgccatgttgggctacctgcaattcgtgtcgtcgatt
gcggcaaatggcaatgactggctgtacagtaatattccttacaagctgggcctgccgccc
aacacggtgattaaccagtggcagttggcggtgcgcgatgggaaaaccctggcctatgtt
gaatccctggcgccgcaacacccgcagtatgccaagatgcaccaggcgctgcgcgccatg
ctggcggatagtcgcccctggccgcggttggccaatggcccaagcctgcgccccggccaa
atgagcaatgatatcccggcactgcgcgaaattctgacgcgtaatggcatgctaagcgct
gcagcggtggcgccggcaacggagcctgcagccgtgctgatttcatcgaatgccggcgac
gacggcggtctttccgttgatgaagagaaagcgcaggaagctccgccagcggtggttagc
ccatccgctgcgccggtaaaggatattgcgccttcagtaacggcggatacagcgcagcag
ccggccgggccggctgcggtcagcgataatatttatactggcgatctggtggaggggata
aaacgtttccaaaaatggcagggcctgagcgacgacggcgttatcggcgcgcgtacgcgc
gagtggctgaatgtgtcgcccaacatgcgcgcttctctgctggccttgaatatccaacgt
ttgcgtattctacccaacagtgtcaataccggcattatggtgaacatccctaactattcg
ctgacttactaccaaaatggtaatgaggtgttgtcatcccgggttattgtcggccggcca
agccgcaaaacaccgatgatgagcagcgtgcttaataacgtggtgatgaatccgccgtgg
aatgtgccgacgacgctggtgcgtgaggatatcgtgccgaaagcgatgcgtgacgccagc
tatttccagaaacacggttatacattgttgtcgggctggagcagcgatgcaacggtgatc
gatccggcgatgattgactggaacacggtttccgcccgtaatttcccgtatcgcatccgc
caggcgccgggcaccaataactcgctggggcgtttcaaattcaatatgccaagctctgat
gccatttatttgcacgatacgccgaatcatgcgctgtttcagaaagacattcgggcactc
agttccggctgtgtgcgtgtgaataaagcgtctgatttggcgaatatgctgctgcaggat
gcgggctggaatgattcccgcgtctcttcgaccctgaagggcggcaacacgacatacgtc
aatattcgccagcatattccggtcaaattgtattatttaacagcctgggtttctgatgat
ggaaagccacaatttcgtacagatatttacaattatgacgatacggtgagatctggcgcg
caaattttggctcaggcagaaaaattactgcagtaa
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