Gossypium raimondii: 105762005
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Entry
105762005 CDS
T04129
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear poly(A) polymerase 4
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
gra
Gossypium raimondii
Pathway
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105762005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105762005
Enzymes [BR:
gra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
105762005
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
105762005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
105762005
NCBI-ProteinID:
XP_012435404
UniProt:
A0A0D2PIT5
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Position
7:complement(51131486..51135647)
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AA seq
544 aa
AA seq
DB search
METQGPNGSLQKQSLPPKNYGITKPISLAGPSEADIQRNTELEQFLIESGLYESKEEAAK
REEVLGHISEIVKSWVKQLTRQRGYTDQMVEEANAVIFTFGSYRLGVHGPGADIDTLCVG
PSYVNREEDFFIILHDILAEMEEVTELQPVPDAHVPVMRFKFQGISIDLLYASISLLVVP
DDLDISHESVLPNVDEQTVRSLNGCRVADEILKLVPNVEHFRMTLRCLEFWAKRRGVYSN
VTGFLGGLNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEEGELGFPV
WDPRKNPQDRFHHMPIITPAYPCMNSSYNVSLSTLRVMMEQFQFGNRICVEIEQNKSQWS
ALFEPHLFFEAYRNYLQVDIVSADADDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYP
NEYVDTSKQFQHCAFFMGLQRKEGVSGLEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYV
SHVCRRQLPAFVFPDGYRRLRSLRHPSQQTGKTCEDVTRSRSGSSCFIGVLSLPISLALP
MMKS
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggagactcagggccctaacggatctttgcagaaacaatcactgcctccgaagaattat
ggaatcacgaaaccaatatcactcgcggggcctagtgaggctgatattcagcggaatacg
gaattagagcagtttctgatagagtcgggactttacgagagcaaagaggaggctgcgaaa
agagaggaggttcttggccatatctctgagattgtaaaaagttgggtaaagcaattaact
cgtcaaagaggctacactgatcagatggtggaggaagcaaatgctgtcattttcactttt
ggatcataccgtttaggggtgcacggacctggggctgacatagacactttgtgtgttggg
ccatcttatgtgaaccgagaggaagatttcttcatcattttgcatgatattttggctgag
atggaggaagtcactgaacttcaaccggttccagatgctcatgtcccagtaatgaggttc
aagttccaagggatatctattgatcttctttatgcaagtatatctcttttggtcgttcca
gatgaccttgacatctcacatgaatctgtgctgcctaatgttgatgagcaaactgttcga
agtcttaatgggtgcagggttgctgatgaaatccttaaacttgtcccaaatgtcgagcac
ttccgcatgactcttaggtgtttggagttctgggcaaagaggcgtggagtttattctaat
gttactggattcctaggaggtttaaattgggctcttctagttgctcgtgtgtgccaactt
tatcccaatgcagtacctagcatgctggtttctcgatttttcagagtgtatactcaatgg
aggtggccaaaccctgttatgttgtgttcaatagaagagggtgaacttggctttccagtc
tgggatccacgcaagaatcctcaggaccgtttccatcatatgccaataattactcctgca
tatccttgcatgaattccagttacaatgtctctttaagtacacttcgtgttatgatggaa
cagttccaatttggtaatagaatatgtgtggagattgagcaaaacaaatctcaatggagt
gctttgtttgagcctcatcttttctttgaggcataccgaaactatctacaagttgacata
gtttcggcagatgctgatgatttactggcatggaaaggctgggtagagtcccggcttaga
cagctaaccttgaagatagagcgggacacaaatggaatgttgcagtgtcacccttaccca
aacgagtatgttgatacatccaagcagttccaacattgtgcttttttcatgggtttgcag
aggaaagagggagtgagtggtctagaaggtcaacaatttgacatacgtggaacagttgat
gagttcagacaggagataagcatgtacatgtactggaaaccaggaatggatatttatgtt
tctcatgtttgtaggaggcagctcccagcgtttgttttccctgatggatatagacggctt
cgatcattgaggcatccaagccagcagactggaaaaacttgtgaagatgtcacgaggtcc
cgctcaggctcttcgtgtttcattggtgttctctctctgcctatatcccttgcactccct
atgatgaagagttga
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