Gossypium raimondii: 105762210
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Entry
105762210 CDS
T04129
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1 isoform X2
KO
K27807
short internodes/stylish family transcription factor
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105762210
Transcription factors [BR:
gra03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
105762210
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Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
105762210
NCBI-ProteinID:
XP_012435560
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Position
7:36034586..36038958
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AA seq
357 aa
AA seq
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MGMVGLRDFVVVAPASFNHHHHHHHHHAQDPIIGNDQINGQNAATALGVGVGVFPLLTAS
PCLAPQNMEDSDLVNNSGRNKLSGMQLWQNQTSPNYLKKQSSTLDNNNSSMNLIQTSGGG
GMGGGSGGSGTSSGTTCQDCGNQAKKDCSHRRCRTCCKSRGFDCPTHVRSTWVPAARRRE
RQLMTAAPTTACAGSSGSTSGAKKPRLVTSQTTTTLHTSTSNTTPRSLDTSSSHQDAGFK
ETLPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKIGGHVFKGFLYDQGVEERDGFPNIS
ELHLGGGSGTNGGSSSSPVLDPSQVYAATGGGLLGGSTYGRCFENLEDLVLPTSVNL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggggatggttggtctccgcgatttcgttgttgttgctcctgcgtcttttaaccatcat
caccatcaccatcaccaccatgctcaagatcccatcatcggaaatgatcaaatcaacggt
caaaatgctgccacggcacttggtgttggcgttggtgttttcccactccttacagcatct
ccatgcttagctcctcaaaatatggaagattctgatttagtgaataacagtggtcgtaac
aaactcagtgggatgcagttatggcagaaccaaacctctcctaattatcttaaaaaacaa
tcttcaacccttgacaataacaattcttccatgaatttgatacaaaccagtggtggcggt
gggatgggaggtgggagtggtggctcaggtactagctcagggactacatgtcaagattgt
gggaaccaggccaagaaagattgtagtcataggagatgtagaacatgctgtaaaagtcgg
ggatttgattgccctactcacgtgaggagcacgtgggtgcctgctgctaggagaagagag
cgccagctgatgacggccgcccctactactgcctgtgctggctcgtcagggtctacttct
ggggctaagaagccgagacttgtgacttcacagactacaaccactcttcatacatcaact
tcaaacactactccaagaagcttagacactagctcaagtcaccaagatgcaggctttaaa
gagacattgccggggcaagtacgtgcaccggcggtattcaagtgtgtaagagtgacagca
gtagaggatggtgaagatgagtatgcatatcaagcagttgttaagattggtggacatgtg
ttcaaagggttcctttatgaccaaggagttgaagaaagagatgggtttccaaatatatct
gaattgcatcttggcggcggcagtgggacaaatgggggttcatcatcctcacctgttctt
gatccttctcaggtttatgccgccactggaggtggcttgcttggtggttcaacttatggt
cggtgctttgagaatttagaagatttagtgcttcccacctctgtcaacctttaa
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