Gossypium raimondii: 105762578
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Entry
105762578 CDS
T04129
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
gra
Gossypium raimondii
Pathway
gra04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
105762578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105762578
03029 Mitochondrial biogenesis [BR:
gra03029
]
105762578
Membrane trafficking [BR:
gra04131
]
Autophagy
Autophagosome formation proteins
ULK complex
105762578
Atg1 complex
105762578
Mitochondrial biogenesis [BR:
gra03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
105762578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
105762578
NCBI-ProteinID:
XP_012435789
UniProt:
A0A0D2SXS0
LinkDB
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Position
12:complement(219696..224567)
Genome browser
AA seq
666 aa
AA seq
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MTSTHTNSHTEAAKMEQVITEFFYKSLLIILESRSSYVSSRNYSGEQTVSSPSSSSSSSS
SVRPRDKWFNLALRECPSALENLDLCRQSNFEPVVVDVVLEQKPLDWGPASFSPTSDLVR
NLSSKNKNSYFWNCDQDESGSEMKCEKIIERWFVQHESRKGRDCNSGNRRSSCNNLSALY
KKLILMLRSLYVTVRLLPAYNIFRDLNSSGLIRSFKLVPRVSSFVEPLARKEEVDMQRFW
FTPVDTSCGRLCLSVLYYSSISDMSSESSTPMSPQFIPDYVGSPLADPLRRFPSLPVSHG
SPSSLPFSRRHSWSYDHYKASPPLVSFSPSPTHSESNALVSNPTSRGLPPMSLPPHPPET
SLAHKRNTNFDEYCPSPNFSASPSPSPSPSLPIYIPRTHLSKDLLRSESAPVNIAAPKLA
NSPALSGKQNLPPSPPLKITRAGTSRADNIRVPAETDATVDKIFSFGKEDCWKYSGVKAF
SNSSPRISCSRSSSRSLQDDFDYSEFPCPFDVEDGEMMDPGSRPESYVRRGNPSDPNEAG
LFMSRKSQDAAVGALVRMLKKAPPLRQNVSLNFSEASRPEILSNSIPKQSQISEAVTVEH
AAAPNIASFRLVASKTTTDALEELRGYKVMKNLLLSEGGKAYTSNVASAAEHSSTSKDRS
ILQVFG
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaactcacactaattctcacactgaagctgccaaaatggaacaagttatcact
gaattcttctataagagtcttctaataatacttgaatcgaggtcttcttatgtatcatca
cgtaattatagtggtgaacaaactgtgtcatctccatcttcatcctcttcatcttcatct
agtgtgagaccaagagataaatggttcaatttagctcttagggagtgcccttcagcgcta
gaaaatcttgacctttgtcgacagagtaattttgaaccagttgttgtcgatgttgtattg
gagcagaaaccacttgattggggacctgcaagcttttcccccacaagtgatcttgttagg
aatttgtcatctaaaaataagaattcatatttctggaattgtgatcaagatgaatcaggc
agcgagatgaaatgtgaaaaaatcatagaaagatggttcgtgcagcatgaaagtagaaag
ggtagggattgtaattcagggaatagaaggtcaagttgtaataacttgagtgcattatat
aagaaattaatactgatgttgaggtccttatacgtgactgtcaggcttttacctgcatac
aacattttccgtgatctgaattcatctggtctaattcgttcctttaagcttgttcctagg
gtatcttcttttgttgaacccttggctcgtaaagaagaggtagatatgcagagattttgg
tttacccctgtggacacttcttgcggaaggctttgcctttcagttttgtactattcatca
atctcagatatgagctccgaatcatcaacccctatgtcccctcaatttataccagattat
gttggaagcccattggcagaccccctgaggagatttccttctcttcctgtatcacatggc
tctccatcatctttaccattctcaagaagacatagttggagttatgaccattacaaggcc
tcaccacctctggtttctttctcaccatcaccaacgcattcagaatcaaatgctttggtt
tctaacccaacctcccgtggtttgccacctatgagcttacctcctcatcctcctgaaaca
tcactagctcataagaggaatacaaactttgatgagtattgtccttcccccaatttctct
gcttccccttccccctctccctcgccatcactccccatctacattcctaggactcatttg
tcaaaagatcttttacgctctgaaagtgctcctgttaacatagcggctcccaagcttgct
aattcccctgcattgtctggcaagcagaatttgccaccgtcacctccccttaaaataaca
agagctggtacttctagggctgataatattagggtgcctgctgaaactgatgctactgtt
gacaagatattttctttcgggaaagaagactgctggaaatactctggagtgaaagctttt
tccaacagctcaccacgaatttcatgttctagaagttccagtaggtctttacaagatgat
tttgactactctgagtttccttgtccatttgatgtggaggatggtgaaatgatggaccct
ggtagcagacctgagtcttacgttagaagaggaaatccatctgatccaaatgaagcaggg
ttgtttatgagtagaaaatcccaggatgctgctgttggtgctcttgtccgaatgctgaaa
aaggcccctcctcttcgccaaaacgtctcccttaatttttcagaagcctcaaggccggaa
atcttgagcaacagcatcccaaagcaaagtcagatctcggaagctgtgactgttgaacat
gctgctgctccgaatatagcatcttttaggcttgttgcatcaaagacaaccaccgatgca
ttagaggaacttcggggttacaaagtgatgaaaaacttgttgcttagtgaagggggtaag
gcttacacatctaatgttgcctctgcagctgaacattccagtaccagcaaagatagaagt
atactacaagtttttggataa
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