Gossypium raimondii: 105762681
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Entry
105762681 CDS
T04129
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gra04812
]
105762681
Cytoskeleton proteins [BR:
gra04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
105762681
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
ANAPC4_WD40
NBCH_WD40
eIF2A
PROPPIN
TPR_21
GEVED
Motif
Other DBs
NCBI-GeneID:
105762681
NCBI-ProteinID:
XP_012435968
UniProt:
A0A0D2SYC0
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Position
12:1352232..1359778
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AA seq
856 aa
AA seq
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MATKRAYKLQEFVAHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKVWDIRKKGCIHTYKGHNRGVNAIRFTPDGRWVVSGGEDNIVKVWDLTAGKLLHD
FKSHEGQIQSLDFHPNEFLLATGSADRTVKFWDLETFELIGSTGPETTGVRCLTFNPDGR
TVLCGLHESLKVFSWEPIRCHDSVDVGWSRLSDLTVHEGKLLGCSYNQSCVGVWVVDISR
IDPHAVPDANCVNSHSEPKSSSGGNPAVLNENTTKASIGRLSVSQISDTLVKETKSLGRL
SISQNSDPAKESKNLASTGNVPDTPQRVNLNTAPKTTQPSSVTVPSGAAPKRSSMRTSSS
VNAPNFNKLDVIPVIVPRNDMRLEQAVESRKEVGISRRSLEQAAESRREVGIAGRSLEPS
QPAAESRKETGPGERTLELGTDPRKELGIVGRTMPFSLQSKTSSFRKFQNNREDMDQPAI
SAPSEGAGSKVDGFSSVLDKSIFPSVKGPMKGMPVAERNAREDMCVGSDKSEPNSVVELP
PNYWDENYSQVKRTHRDAYPLESQKGGKTHVVINLEKRGKPSNYDRPNFGISTGNASMSN
MSSFNSYKQRGYHPSVEKEMPSASDEDAVADVMEQHDQFIGSMQSHLAKLQVVHRYWERN
DVKGAISAMEKMADHAVLADVLSIVTEKIDIVTLDICTCLLPLLSSLLGSEMDRHLCICL
DMLLKLVRVFGPMIYSTLSASTPVGVDIEAEQRFERCNLCFVELEKVKRCLPTVTRRGGS
VAKSAQELNLAFQEVS
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaaacgcgcttacaagctacaggaatttgtggcacactcttcaagtgtgaat
tgcctgaagattggaagaaaatcgtctagggttcttgtgactggaggtgaagatcacaag
gttaatctctgggctatcggaaaacccaacgccatactgagtttgtcaggacacacgagt
ggaatagattcagtgagctttgattcttcagaagtcttggtagctgcaggtgctgcaagt
ggcactatcaagctttgggatttggaggaggcaaaaattgttcggactctgactggtcat
agatccaattgcatctctgtggacttccatccctttggtgagttttttgcatctggttct
cttgatacaaatctcaaggtgtgggatatcagaaagaaaggatgtatccacacgtacaag
ggccataatcgaggagtcaatgcaatcaggtttacaccagatggccgatgggttgtatct
ggcggcgaggacaacattgtgaaggtttgggatttgactgctggaaaactgttgcatgat
ttcaagtctcatgaaggccaaatccagagcttagattttcatcccaatgagtttcttctg
gctacaggttcagctgaccggactgttaaattttgggacctagaaacctttgagcttatt
ggttcaactgggcctgagactactggagtccgttgcttgaccttcaaccctgatgggagg
actgtactctgtggattacatgaaagtctgaaggttttctcatgggaaccaataagatgt
catgatagtgtggatgtggggtggtctagattgtcagatcttactgttcatgaaggaaag
cttcttggctgctcctataatcaaagctgtgttggcgtttgggttgtggacatctcgcgc
atagatcctcatgctgttcctgatgctaattgtgtgaatagtcattctgagcctaaatct
agttctggtggaaaccccgctgtactgaatgagaacacgaccaaagctagtattggaagg
ttatcagtttcacaaatttctgatactttagtgaaggaaacgaaatcccttgggaggtta
tccatttcacaaaactcagatcctgctaaggagtcaaaaaatttggcatccacaggaaat
gtgcctgatacacctcagagagtcaatttgaacactgcccctaagacaactcaaccaagt
tcagtaacagttcctagtggagcagctccaaagaggagttccatgaggactagttcatct
gtcaatgctccaaattttaacaagttagatgtcatacctgtgattgtgcctagaaatgat
atgaggttggagcaggctgttgaatcaagaaaagaagttggaatatcgaggagaagtttg
gaacaggctgccgaatctagaagagaagttggaatagctgggagaagtttggagccgagc
cagccagctgctgaatctagaaaagaaactggaccaggtgagagaactttggagctagga
actgatcctagaaaagaactgggtattgttggaagaacaatgccattttctttgcagtca
aagacctctagttttcggaaatttcaaaataacagagaagacatggatcagccagctatc
tctgctccttctgaaggtgcaggttcaaaggtggatggattcagcagtgttctggacaag
agtatatttccttctgtcaaaggcccaatgaaaggaatgcctgttgctgaaaggaatgca
agagaagatatgtgtgttggctctgataagagtgaaccaaactcagtggtggagttgcct
ccaaactactgggatgaaaattattcacaagtgaaaagaacacatagagatgcatatcct
ttagaaagccaaaaaggaggaaaaacacatgtagtcataaatttggagaaaagagggaaa
ccttctaattatgatagacctaattttggtatatctacagggaatgcatctatgtcaaat
atgtcttcattcaattcgtataaacaaagaggataccatccctctgtcgaaaaagaaatg
ccttctgccagtgatgaggatgctgttgcagatgtaatggagcagcatgaccaattcatt
ggttccatgcagtctcacttagctaagttacaggttgttcatcgatactgggaaaggaat
gacgtaaagggtgcaatcagtgcaatggaaaagatggctgatcatgctgtgcttgcagat
gtcttgagcattgtcactgagaaaatagacattgtcacattggacatttgcacttgtctt
ctgcccctcctgtctagtctccttggaagtgagatggataggcatttgtgcatttgtctt
gacatgctgcttaagctggtcagagtattcggtccaatgatatattcaacattatctgct
tcaacacctgttggtgtagacatcgaggcagagcaaaggtttgaacgttgcaacctctgc
tttgtagaacttgaaaaagtaaagcgatgtctccccacagttactagaagagggggatcg
gtggcaaagtctgcccaggaattgaatctagcatttcaagaagtgtcataa
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