Gossypium raimondii: 105762839
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Entry
105762839 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105762839 isoform X1
KO
K17925
sorting nexin-13
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gra04990
]
105762839
Domain-containing proteins not elsewhere classified [BR:
gra04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
105762839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
IF2_assoc
Motif
Other DBs
NCBI-GeneID:
105762839
NCBI-ProteinID:
XP_012436219
UniProt:
A0A0D2STN3
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Position
12:3196513..3204088
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AA seq
1041 aa
AA seq
DB search
MKPMETIQDLIDEAKVRTLWLAMVIFIVTYFLSHTSTSMWMNLPIAVIIVSTFRVIANEV
EFKWKVKSVHPRTYLSHLERKQLSVNDSRLSSSPPPPKWKQKIDSPIVEAALNEFIDKIL
RDFVINLWYSEITQDREAPELIRALILDAIAEITERVKEINLVDLLTRDIVDLIGDHLDL
FRRNQAAIGVDVMATLSSEERDKRLKHHLMVSGELHPALLSPESEYKVIQQLFGGVLAVV
LRPREAQCPLVRTIAREIVTCLVVLPLLNLASPRYINEVIEYVLLAIKEDLNKIVAGFDQ
SSVGVRDDGSMTCKTPSLNSQETDLNLARIDNQKETYPVCNRYEEEPVHHRPADWARKLE
AATQRRTEVLAPENLENMWTKGRNYKKKESKYVKTGYQESIPKGSETKSGVLMGNSVNDF
SRNKTRTSMGSEEKTMTQLEHGLSLDTQSCDDSMIDTKLAKSSSFEGDRHVNTFKNVSEK
AADGNKIRLKRSSSTSDLKVGTDTKKALSVDVEGPIISECYGPDFDRHSEEYGGKIASNI
VLRNEGPHIPKLRCRVIGAYFEKLASKSFAVYSISVTDAENRTWFVNRRYRNFERLHRHL
KEIPNYSLHLPPKRIFSSSTEDAFVHQRCIHLDKYLQDLLSIPNVAEQHEVWDFLSVSSK
NYSFGKSSSVMKTLAVSVDDAVDDIVRQFRGVSDGLMRKVVGSSSPPSEASSSATGRTLS
WNADEIAKDISKHYNLDTVHSASDNEDGNKDGDHGYEDDGSYSQGLDMHLDNELNSKNLP
PLVIERGRESVNLIYEKHNLGVKTEPFGQGGSPKVKISATSSHLEDPVGMPPEWTPPNVS
VPLLNLVDKVFQLKRRGWLRRQVFWISKQILQLVMEDAIDDWLLRQIYWLRKEETITLGI
RWIQDLLWPGGKFFRAIGDIHSKFDNSNLNQTPIPLLSFSQFGGSNASKPGSFEQQLEAT
RRASDIKKMLFDGPPATLVGLIGYKQYRRCARDIYYFTQSAICIKQLAYAILERLLISVF
PELRDLVMDLHAKNISTLHRK
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatggagacaatacaggatctgatcgacgaagccaaagtacgtacactttgg
ttggccatggttatctttatcgtcacttatttcttgtctcatacaagtacgtcaatgtgg
atgaatttacctatagcagttattattgtttccacattcagagttatagctaatgaggtt
gagttcaaatggaaagttaaatcagttcatccccgaacctatttatctcatttggagagg
aaacagttgtctgtgaatgattcccgcctttctagctcaccgcctccacccaagtggaag
cagaagattgattctcctatagttgaggctgctctcaatgaatttattgataaaatactt
agggattttgtcattaatttgtggtattcagagataactcaagatagagaggcccctgag
ttgatacgtgcattgattttggatgctattgctgaaataactgaaagggtgaaagagata
aaccttgttgatttgcttacaagggatatagttgatttgataggagatcacttggatctt
tttagaagaaaccaagctgcaataggtgttgatgttatggcaacattatcatccgaggag
agggataaaagattgaaacaccaccttatggtttctggagagcttcatcctgcattgctt
tcaccagagagtgagtacaaggttattcagcagctttttggcggagttttagcagtagta
ttgagacctcgagaagctcaatgtcctttggttcgaactattgctcgtgagattgtaact
tgcttggtagtgctacctcttttgaatttggcaagccctcggtatatcaatgaagtgatt
gaatatgttctacttgccattaaagaagatttgaataagatcgtggcaggttttgatcag
tcttcagtgggagtacgtgatgatggttctatgacatgcaaaacaccgtccttgaatagt
caagaaactgatttaaatttggctagaattgacaatcagaaagaaacatatccagtttgt
aacagatatgaggaagaaccagtgcaccatagaccagctgattgggctcgaaaattagag
gcagcaacccagagaagaactgaagttcttgctcctgaaaatcttgaaaacatgtggaca
aaaggaagaaactacaaaaagaaggagagcaaatatgtaaaaacaggatatcaagaatct
attcctaaaggttctgagacaaagagtggtgtactgatggggaattcagtaaatgatttc
tctagaaacaagaccagaacttctatgggaagtgaagagaaaactatgacgcaactagag
catggcttgagccttgacacccagtcatgtgatgatagcatgatagacacaaagttagct
aagtcatcatcatttgaaggagatcgtcatgttaatacatttaaaaatgttagtgagaaa
gctgctgatggaaataaaattaggcttaagagatccagtagtacctctgatttgaaagtt
ggaactgatacaaagaaggcacttagtgtagatgttgaagggcctattatttcagaatgc
tatggccctgattttgacaggcatagtgaagaatatgggggtaagattgcctcaaatata
gtacttcgcaatgaggggccacatattcccaagcttaggtgtcgggttattggagcatac
tttgagaaacttgcatcaaaatcatttgcagtttattcaatttctgtgactgatgcggaa
aacagaacttggtttgtcaatagaagatacagaaattttgaacggttgcatcgacatctg
aaagaaattcccaattattcattacatttgccccccaaaaggatattttcatcaagcaca
gaggatgcttttgttcatcagcggtgcattcatcttgacaaatatctgcaagatctgttg
tctatacccaatgtggctgaacagcatgaagtgtgggattttttaagtgtttcctcaaag
aattactctttcggaaaatcctcatcagtgatgaaaacccttgcagtcagtgtggatgat
gctgtagatgatattgtacgccaatttaggggagtatcagatggcttaatgcgcaaagta
gttggttcatcctctccccctagtgaagcctcttcttcggccaccggcaggacgctgtca
tggaatgcagatgagattgctaaagacatttcaaagcattataacttagacacggtacat
agtgcttctgacaatgaagatggtaacaaagatggggaccatggttatgaggatgatgga
tcatattcacaaggtcttgatatgcatttggacaatgagttgaactcaaagaatttgccg
ccactggtaatagagcgtggtcgggagtctgttaatttaatttatgagaaacataattta
ggtgtgaaaactgaaccgtttggccagggtggatctcctaaggtaaaaatatcagcaacc
tccagccatttggaggatccagttggaatgccccccgagtggacaccgcctaatgtgagc
gtacctttgctgaatctagttgataaggtgtttcagcttaagagaagaggctggctaaga
agacaggtcttttggatatctaagcaaatattacagctggtgatggaggatgccatcgat
gactggctcttgcgccagatatattggcttcggaaggaggaaaccattaccctagggatt
cgatggattcaagatctcttgtggccaggtggtaaattctttagagcaattggggacatt
cacagcaaatttgataatagcaatctcaaccagacacctatacctctgctcagcttcagc
caatttggtgggagtaatgcctctaaacctgggtcctttgagcaacaacttgaggctact
cgtagagcaagcgacatcaaaaaaatgctttttgatggacccccagcaacattagttggc
ctgattggatataagcaataccgacggtgtgcaagagacatttactatttcactcagtct
gctatatgtatcaagcaacttgcttatgcaatcttagaacgactacttatatcagtgttc
cctgagctacgggatcttgtgatggaccttcatgcgaagaacatatcaacattgcataga
aagtag
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