Gossypium raimondii: 105762872
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Entry
105762872 CDS
T04129
Name
(RefSeq) diaminopimelate decarboxylase 2, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gra
Gossypium raimondii
Pathway
gra00300
Lysine biosynthesis
gra00470
D-Amino acid metabolism
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
gra01230
Biosynthesis of amino acids
Module
gra_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
105762872
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
105762872
Enzymes [BR:
gra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
105762872
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
105762872
NCBI-ProteinID:
XP_012436268
UniProt:
A0A0D2R8C2
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All DBs
Position
12:complement(3663607..3667693)
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AA seq
488 aa
AA seq
DB search
MAASHLLSHSSFLPKTLNHSLTQNPFSKSPILPLKPSKNLFKHPSLSLSLKAVLSQNPAK
TLNPTFQHCFTKSPDGFLYCEDTKVQDVMEKVEKRPFYLYSKPQITRNVEAYKEALEGLK
NSIIGYAIKANNNFKILQHLRMLGCGAVLVSGNELKLALRAGFDPTKCIFNGNGKILEDL
VLAAQEGVFVNVDSEFDLENIVAAARIAGRKVNVLLRINPDVDPQVHPYVATGNKNSKFG
IRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDEIRAQGFEV
DYLNIGGGLGIDYYHSGAVLPTPRDLIDTVRELVHSRNLNLIIEPGRSLIANTCCFVNRI
TGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPAPPAAEVSTFDVVGPVCESADF
LGKERELPTPAKGTGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSVTKIRHGETFED
HMRFFEGL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcggctagtcatcttctctctcactcctcatttcttcccaaaaccctaaaccactca
ttaacccagaatccattttccaaatcccccattttgcctctcaagccctccaagaatctc
ttcaagcatccctccctctccctctctctcaaagctgtcctctctcagaaccctgctaaa
accctcaacccaacttttcaacactgcttcactaaatccccagatgggtttctctactgt
gaggataccaaggtccaggatgtcatggaaaaggtcgaaaagaggccgttttatttgtat
agtaagcctcagattactaggaatgtggaagcttataaggaggcccttgaaggcttgaag
aattccattattgggtacgccatcaaggcgaataacaatttcaagattttgcagcatttg
aggatgttgggttgcggtgctgtgcttgttagtggcaatgaactcaagttggctcttcgt
gccggcttcgatccaactaagtgtatctttaatgggaatgggaagatcttggaagatttg
gtactagccgcccaagaaggtgtttttgtcaatgtggatagtgaatttgatctggagaat
attgtagctgctgcaagaattgctggcagaaaggttaatgttttgcttcggatcaaccct
gatgtagatcctcaggtccacccatatgttgctactgggaacaagaactctaaatttggt
attaggaacgagaagctgcagtggtttctggatgctgtaaaggcacatcctaatgagctg
aaacttgtaggggcccactgtcatcttggttcaaccattaccaaggtggatatatttagg
gatgctgctgttctcatggtcaactacattgatgaaattcgtgcccaaggtttcgaggtt
gattatttgaacattggaggtggtttgggtatagattactaccacagtggtgccgtcctt
cccacacctagagatctcattgacactgtcagagaattggtacattcaaggaatcttaat
ctcatcattgaaccaggaagatcactcattgcaaatacttgctgctttgtcaatcgtatc
actggagtcaaaactaatggaacaaaaaatttcattgtgattgatggtagtatggctgaa
ctcatccgtcctagcctttatgatgcttatcaacatatagagttggtttctcctgctcct
cctgctgctgaggtttctactttcgacgttgttggccctgtttgtgaatctgcagatttc
ttgggaaaggagagagaacttcccaccccagctaaggggactggcctggtcgtacatgat
gcaggtgcttactgcatgagcatggcatcaacttacaatctcaagatgcgccctcccgag
tactgggttgaagaagatggatcagtgaccaagattcgacatggggaaacatttgaagac
cacatgcggttttttgaaggtctttaa
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