Gossypium raimondii: 105762934
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Entry
105762934 CDS
T04129
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
gra
Gossypium raimondii
Pathway
gra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105762934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105762934
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105762934
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
HECT type E3
105762934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
ARM_ARMC5
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
105762934
NCBI-ProteinID:
XP_012436365
UniProt:
A0A0D2R8N5
LinkDB
All DBs
Position
12:4457927..4466985
Genome browser
AA seq
1904 aa
AA seq
DB search
METRSRKRAEASSAAPSSSPSGPTTRSHKRVRLSSSSAAAAATVAVTRSRTSRTSRTSAA
LMDPTTIESSSGSRRDRRSSKANQTTTSDNPNLASDRGKEKEHDPRIRDRDRDRDNRDNN
SNHPERNLGLNMDTSGGDEDDNDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSS
AMGSGSSSHQSGRLKKVLSGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPV
LVGLLNHESNPDIMILAARALTHLCDVLPSSCAAVVHYGAVSCFCARLLTIEYMDLAEQS
LQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADYVME
AVPLLTNLLQYHDSKVLEHASVCLTRIAEAFASSPDKLDELCNYGLVTQAASLISISNSG
GGQASLSTPTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGVSANSSVSPAL
SRPAEQIFEIVNLANELLPPLPQGTISLPASSNIFVKGSILKRSPTSSSGKQEDTNRNAL
EVSPREKLLNDQPELLQQFGVDLLPVLIQIYGSSVNSPVRHKCLSVIGKLMYFSSAEMIQ
NLLSVTNISSFLAGVLAWKDPYVLVPSLQIAEILMEKLPGTFSKMFVREGVVHAVDQLVL
IGNQNTTPVQASSLEKDNESVSGASSRSRRYRRRSGNSNLEGSSMEESKNPASLNIGSPT
NSVEIPTANSNLRTAVSACAKAFKDKYFPSDPGAVEVGVTDDLLHLKNLCMKLNAAVNDQ
KTKAKGKSKASGSPWVDFSTSNEEYLTGVISEMLAELSKGDGVSTFEFIGSGVVVALLNY
FSCGYFSQERISDVNLPKLRQQALKRYKSFISVALPSSVDEGSMAPMTVLVQKLQNALSS
LERFPVVLSHSSRSSSGSARLSSGLGALAQPFKLRLCRAPREKSLRDYSSNIVLIDPLAS
LAAVEEFLWPRVQRSDTSQKLSVTVGNSESGNTPNRTDVSSPSTSTPASTTRRHSSRSRS
SVNIGDVARKEQSQEKSTSSSKGKGKAVLKPSKEEPRGPQTRNAARRRAALDKDAPMKPV
NDDSTSEDEELDMSPVEIDDALVIEDDDISDDEDDEHEDVLRDDSLPVCTPDKVHDVKLS
DSAEDGSPAPAASDSQTNAASGSSSRAAAIRGSDSADFRSGYGSRGAMSFAAAAMAGLGS
ANGRGIRGGRDRQGRPPGSSNEPPKLIFTAGNKQLNRHLTIYQAIQRQLVLDEDDDERYA
GSDFTSSDGRGVWSDIYTITYQRAESQADRSSPGGSGSATASKSGKSGSSNSSSDPQPHR
MSLLDSILQGELPCDLDRSNPTYTILALLRVLEGLNQLAPRLRAQIVSDNFAEGNVLTLG
ELSTSGSRVPHEEFINGKLTPKLARQIQDVLALCSGSLPSWCYQLTKACPFLFPFETRRQ
YFYSTAFGLSRALYRLQQHQGADGHGSTNEREVRVGRLQRQKVRVSRNRILDSAAKVMEM
YSSQKTVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVGLAMWRSNSTWNKSVMEIDGDGD
KNGKIAGSATINGDIVQAPLGLFPRPWPPNADASEGSQFFKVIEHFRLVGRVMAKALQDG
RLLDLPLSMAFYKLVLGQELDLHDILSFDAEFGKILQELHLLVRRKQYLDSLGGDNSDAI
PDLRFRGASIEDLCLDFTLPGYPDYILKLGDETVDINNLEEYISLVVDATVKTGIMHQME
AFRDGFNQVFDISSLQIFTPQELDYLLCGRRELWEAETLADHIKFDHGYTAKSPPIVNLL
EIMGELTPEEQRAFCQFVTGAPRLPPGGLAVLNPRLTIVRKHSSSATAAAAANGTGLSES
ADEDLPSVMTCANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccggaagcgggcggaggcctcctcagctgccccttcatcttctccc
tccggtcccaccactcgctctcataaacgcgttcgtctctcttcctcctctgccgctgcc
gccgccaccgtcgctgttactcgctcccgtacttcccgcacatcacgtacttccgctgcc
ttaatggaccccactacaatcgaatcttcttccggttcccgccgtgatcgccgttccagc
aaagctaaccaaaccacaacaagtgacaatccgaatcttgcctctgatagaggaaaggaa
aaggaacatgatcctaggattcgcgatagagatagagacagggataatagagacaacaat
tctaatcatcctgagagaaatttaggattaaatatggacacctctggaggcgatgaggat
gataatgatagcgaaggcggtgtagggattttgcaccagaatctgacgtcagcaagcagc
gcgttacaaggcttgttgaggaagctcggtgccggacttgatgatttgcttccctcatcg
gcaatgggttccgggtcttcatctcatcaaagtgggaggttaaagaaggttctgtctgga
ttgcgtgctgatggagaggaagggaggcaagtggaggcgctgacccagctgtgtgaaatg
ctttcaattggtactgaggaatcgttgagcacgttttctgttgattcctttgttcccgtg
ctcgttggattgcttaatcacgagagtaatcctgatatcatgatacttgctgcaagggcg
cttactcatttgtgtgatgtgttgccttcttcatgtgctgctgttgtgcattatggtgct
gtttcatgtttttgtgctaggttgctcactatagagtatatggacttggctgaacagtct
ctgcaagctctgaagaagatatctcaagaacacccaactgcttgtctgcgagctggtgct
ctcatggcagtgctttcatacttggatttcttctccactggggttcagcgagtggcacta
tctactgctgcaaatatgtgtaagaaactcccttcagatgcagctgattatgtcatggaa
gctgtaccactattaacaaatcttttgcagtatcatgattcgaaggtgctggagcatgca
tctgtttgtttaacgcgcattgctgaagcctttgcatcttccccggataaattagatgag
ctttgcaattatggactggttactcaggctgcatctctcatttccataagtaattctgga
ggtggacaggcatcattgagtacaccaacatatacgggcttaattcggctgctctcaact
tgtgcaagtgggtctcccttgggagcaaaaactttacttctgcttgggatcagtggcata
cttaaagatatactatcaggttctggtgtttcggctaactcatctgtttcaccagcctta
agcagaccggcagagcagatttttgagattgtcaatctggcaaatgagcttcttcctcca
ttgccacaaggaaccatctccctccctgctagctctaatatatttgtgaaaggatctatt
ttgaagaggtctcctactagcagctctgggaagcaagaagacaccaatcgaaatgctctt
gaggtttcaccccgtgagaaattattgaatgatcaacctgaacttcttcagcagtttgga
gtggatctccttcctgttctcattcagatctatggttccagtgtcaatagccctgttcgc
cacaagtgtctctcagttattggaaaactaatgtacttcagcagtgcagagatgattcag
aatctattaagtgtgacaaatatatctagcttcttggctggtgttttagcatggaaagat
ccatatgtcttggttccttccctgcaaattgctgagatcctcatggaaaagcttcctgga
actttctccaaaatgtttgttcgagagggcgtggttcatgctgtggaccagcttgtttta
attggtaatcaaaataccactcctgttcaagcatcttcacttgagaaagataatgagtct
gtatctggagcttcatcacgttctaggcgatatagacgacgtagtggtaactctaatctt
gaaggaagttctatggaggagtccaagaatccagcatctttaaatattggctcacctact
aattcagtcgaaattcctacagccaattccaatcttcgtactgcagtaagtgcatgtgct
aaagcatttaaagataagtatttcccctctgatcctggggctgttgaagttggagtaaca
gatgatctgttacacttaaaaaatctttgcatgaaattgaatgctgctgttaatgatcaa
aagaccaaggcaaaaggaaaatctaaagcttcggggtctccatgggttgatttttctact
agcaatgaagagtatttgactggggtgatttctgagatgctagcagaactaagcaagggg
gatggtgtatccacttttgagtttattggtagtggtgttgttgtggccttgttaaactat
ttttcttgcgggtacttctcccaggagagaatttcagatgtgaacctgcccaagcttcgt
caacaagcccttaagagatacaaatcatttatcagtgttgcccttccttctagtgttgat
gaaggaagtatggctcctatgactgtcctggttcagaagcttcaaaatgctttatcatct
ttagagcgttttcctgtagttcttagccattcatctaggtcatctagtgggagtgcacgc
ctctcttctggtttaggtgcattagctcagccttttaagttgcggctctgtcgagcccca
agagagaagtctcttcgtgactattcttcgaatattgtgttgattgacccattagcaagt
ctagcagctgttgaagaatttctttggcctcgagttcaacgaagtgacacttctcagaaa
ctctctgtgactgttggaaattctgagtctgggaacacacctaaccggactgatgtatct
tctccgtctacctcaactcctgcttctaccacccgacgccattcttcaaggtccagatca
tctgtcaatattggagatgtggccagaaaggagcaatcacaggagaaaagcactagttca
tcaaagggaaaaggtaaggctgttttgaagccttctaaagaggagccaagaggacctcaa
acaagaaatgctgctcgtagaagagctgctctggataaagatgctccaatgaaacctgta
aatgacgactctacttctgaggatgaagaattggatatgtcccctgtggagattgatgat
gctttggtgattgaagatgatgatatttctgatgatgaagatgatgaacatgaagatgtg
ctcagggatgattctcttccagtttgtacacctgataaagtacatgatgttaagttgagt
gattcagctgaagatggttctcctgctccagctgcaagtgatagccaaactaatgcagct
tcaggatctagcagcagagctgctgctattaggggttcagactctgctgattttaggagt
ggctatggctcaaggggtgcaatgtcgtttgcagctgctgccatggctgggcttggatct
gccaatggtagaggtattaggggaggtagagatcgacaaggaagacctcctggcagttct
aatgagcctccaaagttgatattcactgctggtaataagcagctcaacaggcatttgacc
atctatcaggccattcaaagacagcttgtgttggatgaggatgatgatgagagatatgct
ggtagtgattttacatctagtgatggaagaggggtgtggagtgatatctacacaataaca
tatcagagggctgagagccaagctgatcgatcatcaccagggggatcaggttctgctaca
gcatctaaatctggtaaatctggttcatccaattccagctctgatccccaacctcataga
atgtctctattagatagcatattgcaaggggaacttccttgtgatctagacagatccaat
cctacttatactatattggcactgttgcgcgtgttagagggtctgaatcagcttgcacct
cgtttgagagctcagattgtttctgataattttgctgagggaaatgttttaactctgggt
gagttgagcacctccggttctagagttcctcatgaggaatttattaatggtaagctgact
ccaaaactggcgcggcaaattcaggatgttcttgctctatgtagtggaagccttccttcc
tggtgttaccagttgacaaaggcatgccccttcttatttccttttgagacacgaaggcag
tacttctattcaactgcctttgggttgtctcgtgcattatatcgtctgcagcagcatcaa
ggtgctgatggccatgggtcaactaatgaaagagaggtaagggttgggagattacagagg
cagaaagttcgtgtctcccggaaccgcattttggactctgctgcaaaagtgatggagatg
tattccagccaaaaaactgtgcttgaagttgaatattttggagaagttggcaccggattg
ggtccaaccttggagttttatacgcttttaagtcatgacttgcaaaaggttggacttgca
atgtggaggtcgaattctacatggaacaagtcagtgatggaaattgatggagatggagat
aaaaatggaaaaattgctggttctgctactattaacggagatatagtccaagctcctctg
gggttattcccccgaccttggccaccaaatgctgatgcttctgaaggtagccaatttttt
aaagtaattgaacatttccggctggttgggcgtgttatggcaaaagctcttcaagatgga
cggcttttagatctgcctctctcaatggcattttataaacttgtgcttggtcaagagctt
gatttgcatgatattctgtcttttgacgccgaatttggcaaaattctgcaagaattgcat
ttacttgttcgtcgaaagcaatatctagattcattgggtggtgacaatagtgatgcaatt
cctgacttacggttccgtggagcctcaatagaagatctctgtttggatttcacgcttcca
ggatatccggactacatattgaagctaggggatgaaactgtggatatcaacaacttagag
gaatacatatctttggtggttgatgcaactgtgaagactggaattatgcatcaaatggag
gcatttagagacggtttcaatcaggtttttgatatctcatcactgcaaatatttacaccc
caagagttggactatttgctgtgtggtcgtagagagttgtgggaggctgagactcttgct
gatcatataaaattcgatcatggatatactgcaaagagccctccaattgttaatttgctt
gaaattatgggagaattaacaccagaggagcagcgggccttctgtcaatttgttactggt
gcacccaggcttccacccggtggtctggcagtgctaaatccaaggctgacaattgttaga
aagcattcttcgtctgcgactgctgctgctgctgccaatggaactggactctcagaatca
gcagatgaggacttgcctagtgtcatgacttgtgctaattacttgaagcttcctccatat
tctaccaaggaaattatgtataagaaattgctatatgcaatcaatgaagggcaaggatct
tttgatttgtcatga
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integrated database retrieval system
