Gossypium raimondii: 105762988
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Entry
105762988 CDS
T04129
Name
(RefSeq) ubiquitin domain-containing protein DSK2a
KO
K04523
ubiquilin
Organism
gra
Gossypium raimondii
Pathway
gra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105762988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105762988
03051 Proteasome [BR:
gra03051
]
105762988
Membrane trafficking [BR:
gra04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
105762988
Proteasome [BR:
gra03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
105762988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Ubiquitin_2
UBA_NBR1_C
XPC-binding
DUF5560
Dsc3_N
Rad60-SLD_2
RPW8
COG2p_C
Motif
Other DBs
NCBI-GeneID:
105762988
NCBI-ProteinID:
XP_012436442
UniProt:
A0A0D2PNI0
LinkDB
All DBs
Position
12:5394454..5400347
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AA seq
553 aa
AA seq
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MGGDGDSSESRLGDNGGGEEEGVMVNIRCSNGSKFTVRTKLESTIGSFKVVLAQSCDIPA
DQQRLIYKGRILKDDQTLQSYGLQADHTIHMVRSFAPSSSAPPPVATTNVGTPNTTPGVT
RGVGSNEGAGLGASIFPGLNPLGGNGGSFGLFGSGLPEFEQVQQQLTQNPNMMREIMNTP
AIQSLVNNPELMRTLIMSNPQMREIIDRNPELGHILNDPSILRQTLEAARNPELMREMMR
NTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGNNGNSPGSNPFAALLGNQGGSQ
ARDSPSNISVTGSESIQGQTSPNTNPLPNPWNNTVRGVTQTNTTARSNPAGDARTPGIGG
LGGLGLPDMPPMLNGMPDASQMTQLLQNPAISQMMQSIMSNPQYMNQIMNLNPQLREMFD
LNPQLREMMQNPEVLRQMFSPDTMQQMLSLQQSLMSQLNRQQTSQDSTQTSGTAGAPPTA
SLDLLMNMFGGLGAGGLSVPNQPDVPPEELYATQLSQLQEMGFYDTQENIRALRATAGNV
HAAVERLLGNSGQ
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggatggcgattcgagtgagtcaagactcggtgacaatggaggaggagaagaa
gagggagtgatggttaatatccgatgctctaatggttcaaaatttacggttaggaccaaa
ctcgaatcaaccattggatctttcaaagttgttttagctcagagttgcgatatcccagct
gatcagcaacgattgatttataaaggccgaatcttaaaagacgaccaaacccttcaaagt
tacggtttgcaagctgatcatactattcatatggtccgtagttttgccccatcttcatcg
gcccctcctcctgttgctactacaaatgttggaactccaaatactacaccaggggtcaca
cgtggtgttggttctaatgagggtgctggtctgggagcatcaattttccctggacttaat
ccgcttggtggtaatggaggtagttttggtttgtttggatcaggacttcctgaatttgaa
caagtacagcaacaactaactcaaaatcccaacatgatgagggaaataatgaatacacct
gctattcaaagtttggtgaataacccagagttaatgcgcactttgattatgagcaatccc
caaatgcgtgagattattgaccggaatccagagcttgggcatatacttaatgatcctagc
attctgcgacagactttggaagctgctaggaatcctgaactcatgcgtgaaatgatgcga
aacactgacagggctatgagtaatattgaatcctctcctgagggatttaacatgcttagg
cgtatgtatgaaaatgttcaggagccatttttgaatgctacaactatggctggaaataat
ggaaattctccaggttcaaacccattcgcagcccttttgggcaatcaaggcggttctcaa
gctagggattcacctagtaacatttctgtaactggttctgaaagcattcaaggacaaact
tccccaaacacaaatcctcttcctaacccttggaacaacactgttagaggtgtaacccag
accaatactactgcgaggtcaaatcctgctggggatgctaggacaccaggtattggtggt
ctgggaggcctcgggcttccagatatgccacccatgttgaatggaatgccagatgcttct
cagatgactcaattgttgcaaaatccagctatatcacagatgatgcagagcataatgtct
aatccccaatatatgaatcagattatgaacctcaacccccaacttcgtgaaatgtttgat
ttgaatcctcaattgagagaaatgatgcaaaacccagaagtacttcgtcagatgttttcc
cctgatacaatgcagcaaatgctatctttacagcagtctcttatgtctcagctcaatcga
cagcaaacatcccaggattcaacacagacaagtggtactgcaggagcaccccctactgct
agtctggatttgttgatgaatatgtttggtggtctaggtgctggcggcctcagtgttccc
aaccaacctgatgttcccccagaagaactgtatgccacgcaattatcacaactccaagaa
atgggcttctatgatacacaagagaatatcagagcacttcgtgctactgcgggaaacgtc
catgctgcagttgagagactcctgggaaattctgggcagtaa
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